Genomic Map
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Target Gene Details
Entrez Gene ID: | 100506472 |
Gene Name: | uncharacterized LOC100506472 |
Gene Aliases: |
- |
Location: |
Chr.22:39432160-39437128 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LOC100506472 | NR_040535.1 | 4 | 3220 |
Target Gene Details
Entrez Gene ID: | 10454 |
Gene Name: | TGF-beta activated kinase 1/MAP3K7 binding protein 1 |
Gene Aliases: |
3'-Tab1, MAP3K7IP1 |
Location: |
Chr.22:39399754-39437127 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TAB1 | NM_153497.2 | 11 | 1649 | NP_705717.1 |
| AF425640.1 | AAN32760.1 | |||
| AI827837.1 | 1 | 346 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv471200 | Chr.22:39416404 - 39478309 on Build GRCh38 | Loss |
 LOC100506472
MGAT3
TAB1
MGAT3-AS1
|
| nsv834199 | Chr.22:39324389 - 39531343 on Build GRCh38 | Loss |
LOC100506472
MGAT3
ATF4
RPS19BP1
TAB1
MGAT3-AS1
SYNGR1
MIEF1
|
| nsv3628 | Chr.22:39435098 - 39468570 on Build GRCh38 | Insertion |
LOC100506472
MGAT3
TAB1
|
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Additional Information:
For this assay, SNP(s) [rs74658578] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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