Hs01401266_cn

• Gene Symbol: ADAT3
• Assay Reference Genome Location: Chr.19:1913233 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 113179
• Gene Name: adenosine deaminase, tRNA specific 3
• Gene Aliases: FWP005, MRT36, MST121, MSTP121, S863-5, TAD3
• Location: Chr.19:1905372-1913447 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADAT3	NM_138422.2	2	1412	NP_612431.2
	BC011824.1	2	1366	AAH11824.1

Target Gene Details

• Entrez Gene ID: 113178
• Gene Name: secretory carrier membrane protein 4
• Gene Aliases: SCAMP-4
• Location: Chr.19:1905374-1926013 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCAMP4	NM_079834.2			NP_524558.1
	AK074586.1			BAC11075.1
	AK074967.1			BAC11322.1
	AK092056.1			BAC03797.1
	AK307641.1
	AK307700.1
	BC011747.2			AAH11747.1
	BC016509.1			AAH16509.1
	BC062598.1			AAH62598.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	CSNK1G2-AS1 BTBD2 REXO1 ADAT3 CSNK1G2 ONECUT3 ATP8B3 SCAMP4 AP3D1 ABHD17A LOC100288123 MKNK2 MIR1909 KLF16 IZUMO4 MOB3A
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	CSNK1G2-AS1 RPS15 TCF3 REXO1 SCAMP4 ABHD17A GAMT PCSK4 MIR1909 ADAMTSL5 KLF16 UQCR11 PLK5 REEP6 APC2 BTBD2 NDUFS7 DAZAP1 MUM1 ADAT3 CSNK1G2 ONECUT3 ATP8B3 LOC100288123 MEX3D MBD3 C19orf25
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	CSNK1G2-AS1 BTBD2 REXO1 ADAT3 CSNK1G2 ATP8B3 SCAMP4 ABHD17A LOC100288123 MKNK2 MIR1909 KLF16 IZUMO4 MOB3A
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	ATP8B3 SCAMP4 ABHD17A LOC100288123 MIR1909 KLF16 REXO1 ADAT3
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	CSNK1G2-AS1 RPS15 TCF3 REXO1 SCAMP4 ABHD17A GAMT PCSK4 MIR1909 ADAMTSL5 KLF16 UQCR11 PLK5 REEP6 APC2 BTBD2 NDUFS7 DAZAP1 MUM1 ADAT3 CSNK1G2 ONECUT3 ATP8B3 LOC100288123 MKNK2 MEX3D MBD3 C19orf25
nsv1160561	Chr.19:1884553 - 2003982 on Build GRCh38	Deletion	CSNK1G2 CSNK1G2-AS1 SCAMP4 ABHD17A BTBD2 ADAT3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

deaminase, transfer/carrier protein

Gene Ontology Categories:

Process(es)

tRNA modification
RNA modification
protein transport

Function(s)

zinc ion binding
deaminase activity