Assay Details

Target Gene Details

Entrez Gene ID:	2323
Gene Name:	fms related tyrosine kinase 3 ligand
Gene Aliases:	FL, FLT3L
Location:	Chr.19:49474172-49487038 on Build GRCh38
Assay Gene Location:	Overlaps Exon 3 - Intron 3

Gene Symbol	Transcript Accession	Protein ID
FLT3LG	NM_001204502.1	NP_001191431.1
	NM_001204503.1	NP_001191432.1
	NM_001278637.1	NP_001265566.1
	NM_001278638.1	NP_001265567.1
	NM_001459.3	NP_001450.2
	XM_005258680.4	XP_005258737.3
	XM_005258681.4	XP_005258738.3
	XM_005258682.4	XP_005258739.3
	XM_005258683.4	XP_005258740.3
	XM_006723116.3	XP_006723179.2
	XM_011526675.2	XP_011524977.1
	XM_011526676.2	XP_011524978.1
	XM_011526677.2	XP_011524979.1
	XM_011526678.2	XP_011524980.1
	XM_011526680.2	XP_011524982.1
	XM_011526682.2	XP_011524984.1
	XM_017026532.1	XP_016882021.1
	XM_017026533.1	XP_016882022.1
	XM_017026534.1	XP_016882023.1
	XM_017026535.1	XP_016882024.1
	AI792400.1
	AK301136.1
	BC006331.2	AAH06331.1
	BC011914.2	AAH11914.1
	BC028001.1
	BC126293.1
	BC136464.1
	BC144129.1
	DB490139.2
	U03858.1	AAA19825.1
	U04806.1	AAA17999.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SIGLEC11 TRPM4 PPP1R15A BSPH1 CGB3 PTOV1-AS1 SPHK2 PPFIA3 C19orf68 CD37 PLA2G4C-AS1 GFY NUCB1-AS1 MAMSTR BCAT2 FLJ26850 DHDH SYNGR4 MIR4751 TSKS SNAR-A14 C19orf73 PRMT1 PTOV1-AS2 GRIN2D RRAS BCL2L12 CARD8 PNKP LIG1 ALDH16A1 GYS1 SNAR-A6 CYTH2 HSD17B14 SNAR-C5 SNAR-A9 PRR12 SNAR-B1 NTN5 SNAR-A3 SNORD32A LHB LIN7B IRF3 ADM5 LOC101059948 AP2A1 SNAR-B2 SNAR-A5 SNAR-G1 BAX TULP2 DKKL1 GRWD1 LOC100287477 RPL18 VRK3 RUVBL2 SULT2B1 CABP5 MIR4749 PRRG2 SLC17A7 LMTK3 SLC6A16 SNRNP70 MIR4324 FTL MIR6799 EMP3 SNAR-C4 SNAR-A7 SEC1P SNAR-G2 SNAR-C2 ZNF473 CGB5 SIGLEC16 NTF4 SNORD35B SNAR-C3 SNAR-A1 CCDC155 RASIP1 PLEKHA4 PIH1D1 CGB2 FLT3LG NOSIP FUZ CGB7 ELSPBP1 RPL13A FUT1 KCNA7 RPS11 IZUMO1 FGF21 FAM83E SNAR-A11 MIR4750 TMEM143 MIR150 TBC1D17 SNORD33 CARD8-AS1 SNAR-A2 MED25 KDELR1 CGB8 LOC101928295 SNAR-C1 SCAF1 TEAD2 KCNJ14 DBP RCN3 SNAR-D IL4I1 SNORD34 LOC105372430 CCDC114 CA11 ZNF114 CPT1C SNAR-A4 SNAR-A13 MIR6798 AKT1S1 SPACA4 PLA2G4C HRC MIR6800 SNAR-A12 NUCB1 SNAR-A10 NUP62 PTOV1 FUT2 PTH2 SNORD35A LOC105447645 MIR5088 FCGRT ATF5 SNAR-A8 CGB1
nsv833862	Chr.19:49448789 - 49570676 on Build GRCh38	Loss	SNORD35B RPS11 SNORD32A RCN3 MIR150 SNORD34 SNORD33 SNORD35A PIH1D1 FLT3LG NOSIP ALDH16A1 FCGRT RPL13A
esv3644624	Chr.19:49461676 - 49475440 on Build GRCh38	Gain	FLT3LG ALDH16A1
nsv953599	Chr.19:49386444 - 49506743 on Build GRCh38	Deletion	SNORD35B RPS11 SNORD32A LOC101928295 SLC17A7 CCDC155 MIR150 SNORD34 PTH2 SNORD33 SNORD35A PIH1D1 FLT3LG ALDH16A1 GFY RPL13A

More Information

Additional Information:

For this assay, SNP(s) [rs75750998] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

Intragenic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

cytokine

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)

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System Message

Genomic Map

Assay Details

Target Gene Details

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