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See other PTBP1 CNV Assays ›
Gene Symbol
PTBP1
Assay Reference Genome
Location

Chr.19:804679 on build GRCh38
Cytoband
19p13.3
Assay ID Hs01433978_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5725

Gene Name:

 polypyrimidine tract binding protein 1

Gene Aliases:

 HNRNP-I, HNRNPI, HNRPI, PTB, PTB-1, PTB-T, PTB2, PTB3, PTB4, pPTB

Location:

 Chr.19:797392-812327 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 7 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTBP1 NM_002819.4 NP_002810.1
NM_031990.3 NP_114367.1
NM_031991.3 NP_114368.1
XM_005259597.2 XP_005259654.1
XM_005259598.2 XP_005259655.1
AB208910.1 BAD92147.1
BC002397.2 AAH02397.1
BC004383.1 AAH04383.1
BC013694.1 AAH13694.1
BQ068293.1
BT006819.1 AAP35465.1
X60648.1 CAA43056.1
X62006.1 CAA43973.1
X65371.1 CAA46443.1
X65372.1 CAA46444.1
X66975.1 CAA47386.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3643371 Chr.19:794878 - 807625 on Build GRCh38 Loss MIR4745 PTBP1
dgv134n111 Chr.19:607984 - 967584 on Build GRCh38 Deletion POLRMT MIR3187 PALM RNF126 PLPPR3 ARID3A CFD AZU1 KISS1R ELANE RNU6-9 PRTN3 R3HDM4 MISP MED16 MIR4745 FGF22 FSTL3 PRSS57 HCN2 PTBP1 LOC101928450
nsv828353 Chr.19:775335 - 812296 on Build GRCh38 Loss MIR4745 PTBP1 LOC101928450
nsv828354 Chr.19:796933 - 815173 on Build GRCh38 Gain MIR3187 MIR4745 PLPPR3 PTBP1
nsv458321 Chr.19:797079 - 850574 on Build GRCh38 Loss PRTN3 MIR3187 MIR4745 PLPPR3 PTBP1 AZU1
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion MIR3187 PALM RNU6-2 POLR2E ODF3L2 AZU1 ELANE RNU6-9 LOC105372235 THEG R3HDM4 MISP MIR4745 PRSS57 GPX4 WDR18 TPGS1 PTBP1 TMEM259 GZMM CDC34 POLRMT ARHGAP45 GRIN3B SHC2 C2CD4C RNF126 PLPPR3 BSG ARID3A CFD KISS1R CNN2 PRTN3 MED16 FGF22 FSTL3 MADCAM1 HCN2 ABCA7 LOC101928450
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss MIR3187 PALM ODF3L2 AZU1 ELANE RNU6-9 LOC105372235 R3HDM4 MISP MIR4745 PRSS57 WDR18 TPGS1 PTBP1 GZMM CDC34 POLRMT GRIN3B SHC2 C2CD4C RNF126 PLPPR3 BSG ARID3A CFD KISS1R PRTN3 MED16 FGF22 FSTL3 MADCAM1 HCN2 LOC101928450

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