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See other C9ORF139 CNV Assays ›
Gene Symbol
C9orf139
Assay Reference Genome
Location

Chr.9:137036279 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01468053_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401563

Gene Name:

 chromosome 9 open reading frame 139

Gene Aliases:

 -

Location:

 Chr.9:137027464-137037770 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C9orf139 NM_207511.2 3 3312 NP_997394.1
XM_017014717.1 3 2277 XP_016870206.1
AK093587.1 2 1681 BAC04202.1
AK124899.1 3 3312 BAC85986.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss PRR31 FUT7 C9orf139 ABCA2 PTGDS LCNL1 DPP7 C9orf142 MAN1B1-AS1 GRIN1 CLIC3 ENTPD2 LOC101930307 NPDC1 SAPCD2 TMEM210 MAN1B1 UAP1L1 MIR3621 LRRC26
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss FBXW5 LCNL1 PHPT1 C8G CCDC183-AS1 RNF208 TRAF2 ENTPD8 RNF224 LCN12 TOR4A TMEM203 CYSRT1 LRRC26 PRR31 FUT7 NELFB NSMF DPP7 C9orf142 MAMDC4 TPRN CLIC3 PNPLA7 EXD3 MIR4479 LOC101930307 MAN1B1 CCDC183 UAP1L1 MIR3621 SSNA1 PTGDS TUBB4B STPG3 FAM166A C9orf172 ANAPC2 MIR4292 ENTPD2 SAPCD2 NDOR1 EDF1 C9orf139 ABCA2 MAN1B1-AS1 MIR7114 GRIN1 SLC34A3 NPDC1 TMEM210 NRARP RABL6 NOXA1 C9orf173-AS1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion PRR31 FUT7 C9orf139 ABCA2 PTGDS LCNL1 DPP7 C9orf142 MAN1B1-AS1 C8G CLIC3 LCN12 ENTPD2 LOC101930307 NPDC1 SAPCD2 MAN1B1 UAP1L1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss CARD9 FBXW5 LCNL1 MIR126 FAM69B PHPT1 C8G CCDC183-AS1 TRAF2 DNLZ LCN12 LRRC26 MIR4673 LCN10 PRR31 PMPCA FUT7 DPP7 C9orf142 MAMDC4 SNORA17A CLIC3 AGPAT2 SDCCAG3 MIR4479 LOC101930307 NALT1 MAN1B1 LINC01451 CCDC183 MIR4674 LCN15 UAP1L1 MIR3621 INPP5E PTGDS HSPC324 SNAPC4 C9orf172 LOC100128593 MIR4292 NOTCH1 ENTPD2 SAPCD2 LCN6 SNORA17B EGFL7 MIR6722 EDF1 C9orf139 ABCA2 MAN1B1-AS1 C9orf163 GRIN1 LCN8 SEC16A NPDC1 TMEM210 TMEM141 RABL6 SNHG7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain SSNA1 FUT7 C9orf139 DPP7 MAN1B1-AS1 GRIN1 ANAPC2 ENTPD2 LOC101930307 NPDC1 SAPCD2 TMEM210 MAN1B1 UAP1L1 MIR3621 LRRC26
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion FBXW5 LCNL1 MIR126 FAM69B PHPT1 C8G CCDC183-AS1 RNF208 TRAF2 RNF224 LCN12 TOR4A TMEM203 CYSRT1 LRRC26 LCN10 PRR31 FUT7 NELFB DPP7 C9orf142 MAMDC4 TPRN SNORA17A CLIC3 AGPAT2 EXD3 MIR4479 LOC101930307 MAN1B1 LINC01451 CCDC183 LCN15 UAP1L1 MIR3621 SSNA1 PTGDS TUBB4B STPG3 FAM166A HSPC324 C9orf172 ANAPC2 LOC100128593 MIR4292 ENTPD2 SAPCD2 LCN6 SNORA17B EGFL7 NDOR1 MIR6722 EDF1 C9orf139 ABCA2 MAN1B1-AS1 GRIN1 SLC34A3 LCN8 NPDC1 TMEM210 TMEM141 NRARP RABL6 C9orf173-AS1 SNHG7
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss ENTPD2 FUT7 NPDC1 C9orf139 ABCA2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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