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See other TMC4 CNV Assays ›
Gene Symbol
TMC4
Assay Reference Genome
Location

Chr.19:54168229 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01471581_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 147798

Gene Name:

 transmembrane channel like 4

Gene Aliases:

 -

Location:

 Chr.19:54160095-54173250 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMC4 NM_001145303.2 5 890 NP_001138775.2
NM_144686.3 5 872 NP_653287.2
XM_011526486.2 5 855 XP_011524788.1
AK314973.1 5 793
AY236492.1 5 889 AAP69870.1
AY263166.1 5 769 AAP78781.1
BC025323.1 5 779 AAH25323.1
BQ082417.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss NDUFA3 CNOT3 TFPT LENG1 PRPF31 MBOAT7 TMC4
nsv9751 Chr.19:54158885 - 54193528 on Build GRCh38 Gain TSEN34 LENG1 MBOAT7 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion NDUFA3 CNOT3 TFPT TSEN34 LENG1 PRPF31 MBOAT7 OSCAR TMC4
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion TFPT MIR518A2 MIR520D LILRB2 MIR520E MIR516A2 MYADM MIR519E MIR520G MBOAT7 DPRX LILRA6 ZNF525 MIR517A RPS9 MIR519C ZNF331 CNOT3 NLRP12 MIR524 LENG1 MIR527 MIR512-1 CACNG6 TMC4 MIR515-1 NDUFA3 MIR519A1 MIR371A MIR519B MIR525 MIR518E TSEN34 MIR518D ZNF761 MIR521-2 MIR516B1 MIR523 LILRB5 MIR526B TARM1 MIR515-2 MIR519D CACNG7 VN1R4 MIR1323 MIR1283-1 LOC284379 MIR4752 ZNF818P MIR518C MIR516B2 BIRC8 MIR520H MIR373 MIR517C PRPF31 VSTM1 ZNF845 OSCAR LILRA5 MIR1283-2 MIR521-1 VN1R2 MIR371B MIR519A2 ZNF677 MIR516A1 MIR520F ZNF765 MIR522 FAM90A27P LILRB3 MIR520B MIR526A1 MIR517B MIR520C MIR518F MIR512-2 MIR498 MIR518B MIR935 ZNF665 LOC105372457 TPM3P9 MIR526A2 ZNF813 PRKCG CACNG8 MIR372 MIR520A MIR518A1
nsv510774 Chr.19:54158011 - 54269511 on Build GRCh38 Deletion LILRB3 TSEN34 LENG1 MBOAT7 LILRB5 LILRA6 TMC4 RPS9
nsv428371 Chr.19:54163847 - 54366984 on Build GRCh38 Gain+Loss LAIR1 LILRA5 LILRB3 LILRB2 TSEN34 LILRA4 MIR4752 MBOAT7 LILRB5 LILRA6 TMC4 RPS9

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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