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See other RANBP1 CNV Assays ›
Gene Symbol
RANBP1
Assay Reference Genome
Location

Chr.22:20116229 on build GRCh38
Cytoband
22q11.21
Assay ID Hs01509657_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5902

Gene Name:

 RAN binding protein 1

Gene Aliases:

 HTF9A

Location:

 Chr.22:20115938-20127357 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RANBP1 NM_001278639.1 1 292 NP_001265568.1
AK097659.1 1 292
CA489474.1
DC397929.1 1 292

Target Gene Details

Entrez Gene ID:

 27037

Gene Name:

 tRNA methyltransferase 2 homolog A

Gene Aliases:

 HTF9C

Location:

 Chr.22:20111866-20117305 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRMT2A NM_001257994.1 2 797 NP_001244923.1
NM_022727.5 2 797 NP_073564.3
NM_182984.4 3 673 NP_892029.2
XM_011530139.2 3 604 XP_011528441.1
XM_017028770.1 2 807 XP_016884259.1
AK025106.1 1 193 BAB15067.1
AK057029.1 2 747 BAB71349.1
AK304068.1 2 728
BC013352.2 2 442 AAH13352.2
BC017184.2 3 559 AAH17184.2
BC108251.1 2 477 AAI08252.1
BI756672.1 3 586
BX349795.2 2 795
CR456354.1 2 518 CAG30240.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain DGCR6L RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 LINC00896 MIR1306 MIR6816 LOC440792 DGCR8 MIR3618
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain DGCR6L ARVCF CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR4761 LOC101927859 CLDN5 MIR1286 MIR185 TBX1 UFD1L SEPT5 LOC440792 COMT C22orf29 TXNRD2 MIR3618 RANBP1 CDC45 GP1BB TANGO2 LINC00896 MIR1306 MIR6816 GNB1L LINC00895 SEPT5-GP1BB DGCR8
esv3647284 Chr.22:19985583 - 20137122 on Build GRCh38 Gain ARVCF RANBP1 ZDHHC8 TRMT2A TANGO2 DGCR8 MIR185 MIR1306 MIR3618 MIR6816
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain DGCR6L ARVCF CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR4761 MIR1286 MIR185 TBX1 SEPT5 LOC440792 COMT C22orf29 TXNRD2 MIR3618 RANBP1 GP1BB TANGO2 LINC00896 MIR1306 MIR6816 GNB1L SEPT5-GP1BB DGCR8
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss DGCR6L ARVCF CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR4761 MIR1286 MIR185 TBX1 SEPT5 LOC440792 COMT C22orf29 TXNRD2 MIR3618 RANBP1 GP1BB TANGO2 LINC00896 MIR1306 MIR6816 GNB1L SEPT5-GP1BB DGCR8
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss DGCR6L RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 TANGO2 LINC00896 MIR1306 MIR6816 LOC440792 DGCR8 MIR3618
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 DGCR8 LINC00896 MIR1306 MIR3618 MIR6816
dgv4481n100 Chr.22:20114567 - 20291605 on Build GRCh38 Gain RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 LINC00896 MIR6816
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss DGCR6L RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 TANGO2 LINC00896 MIR185 MIR1306 MIR6816 LOC440792 DGCR8 MIR3618
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain DGCR6L ARVCF RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR4761 MIR1286 TANGO2 LINC00896 MIR185 TBX1 MIR1306 MIR6816 GNB1L LOC440792 COMT C22orf29 TXNRD2 DGCR8 MIR3618
nsv834133 Chr.22:20029363 - 20176708 on Build GRCh38 Loss RANBP1 CCDC188 ZDHHC8 TRMT2A TANGO2 DGCR8 MIR185 MIR1306 MIR3618 MIR6816
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion RANBP1 CCDC188 ZDHHC8 TRMT2A LOC284865 RTN4R MIR1286 LINC00896 MIR1306 MIR6816 LOC440792 DGCR8 MIR3618

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