Hs01516831_cn

• Gene Symbol: NTN5
• Assay Reference Genome Location: Chr.19:48661528 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 126147
• Gene Name: netrin 5
• Gene Aliases: -
• Location: Chr.19:48661407-48673119 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NTN5	NM_145807.2	7	1789	NP_665806.1
	XM_017026274.1	6	2015	XP_016881763.1
	BC018654.2	7	1715	AAH18654.2
	BC018697.2	7	1715	AAH18697.2
	BC033207.1	7	1715	AAH33207.1

Target Gene Details

• Entrez Gene ID: 653677
• Gene Name: secretory blood group 1, pseudogene
• Gene Aliases: SEC1
• Location: Chr.19:48638039-48682245 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEC1P	NR_004401.2
	AK301046.1
	AK301238.1
	D87946.1
	D87947.1
	DC353776.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-G1 ZNF114 SNORD32A BCL2L12 FUZ CA11 SNAR-A13 SNAR-C5 CGB8 DKKL1 CGB2 FGF21 PIH1D1 FLJ26850 LOC100287477 MIR150 RASIP1 CARD8-AS1 SNAR-A3 CGB5 NUCB1-AS1 SNAR-A9 IZUMO1 PTOV1 TSKS KCNA7 PRMT1 SNAR-A2 PTH2 LOC101928295 MIR4751 SNORD33 IL4I1 SNAR-B1 FUT1 PTOV1-AS1 GRIN2D MIR6799 LOC101059948 SPACA4 PTOV1-AS2 TEAD2 PPP1R15A GFY SCAF1 FUT2 MIR6800 IRF3 RPS11 NUCB1 SYNGR4 SNAR-C2 SEC1P PRRG2 SLC17A7 MIR4749 SNAR-G2 TULP2 RPL18 ADM5 BSPH1 ALDH16A1 SLC6A16 LOC105372430 SNRNP70 SNAR-A7 C19orf68 GRWD1 EMP3 CGB7 CGB3 PPFIA3 CPT1C PRR12 SIGLEC11 SNAR-A8 ELSPBP1 CYTH2 SULT2B1 PNKP KDELR1 MIR4324 CABP5 LHB SNAR-A14 SNAR-A10 AKT1S1 SIGLEC16 MAMSTR LOC105447645 LMTK3 LIG1 TMEM143 RPL13A SNAR-A4 PLA2G4C BAX NOSIP RUVBL2 MED25 FLT3LG SNORD35B MIR5088 HSD17B14 RRAS CD37 SNAR-A1 CGB1 NTN5 SNAR-A12 C19orf73 FTL SNAR-A5 TBC1D17 ZNF473 MIR4750 NUP62 SNAR-C3 GYS1 CCDC114 DBP LIN7B HRC PLEKHA4 TRPM4 KCNJ14 DHDH ATF5 SNORD34 FAM83E NTF4 SNAR-A6 SNAR-A11 SPHK2 CCDC155 SNORD35A PLA2G4C-AS1 FCGRT SNAR-B2 SNAR-D CARD8 AP2A1 SNAR-C1 RCN3 BCAT2 VRK3 MIR6798 SNAR-C4

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein