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See other ATP6V0C CNV Assays ›
Gene Symbol
ATP6V0C
Assay Reference Genome
Location

Chr.16:2519375 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01542036_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 527

Gene Name:

 ATPase H+ transporting V0 subunit c

Gene Aliases:

 ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3

Location:

 Chr.16:2513726-2520223 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V0C NM_001198569.1 NP_001185498.1
NM_001694.3 NP_001685.1
AW161158.1
BC004537.2 AAH04537.1
BC007389.2 AAH07389.1
BC007759.2 AAH07759.1
BC009290.2 AAH09290.1
BI548787.1
BT007155.1 AAP35819.1
CR541930.1 CAG46728.1
CR541951.1 CAG46749.1
M62762.1 AAA60039.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication GNG13 HBA1 ATP6V0C HAGH RHBDL1 SNHG9 GFER RPL3L CCDC78 CRAMP1 SNRNP25 CEMP1 MIR4717 NOXO1 SOX8 POLR3K NPRL3 SNORA78 LOC105371038 FAM234A MIR3180-5 TPSD1 LOC105371047 RPUSD1 LOC107984876 AXIN1 MIR5587 METRN NME4 CCDC154 MIR940 WASIR2 JMJD8 MCRIP2 ABCA17P MAPK8IP3 LOC106660606 RAB26 WDR90 NTN3 MRPL28 METTL26 NME3 DECR2 BRICD5 RNF151 ZNF598 CHTF18 MIR4516 TBC1D24 PRR35 C1QTNF8 KCTD5 CLCN7 RPS2 TELO2 NUBP2 RPL23AP5 CAPN15 RAB11FIP3 AMDHD2 SSTR5 LOC729652 SLC9A3R2 NDUFB10 SNORD60 PIGQ SNORA64 MIR3677 IGFALS MIR3177 TMEM8A TMEM204 MIR6767 C16orf91 CCNF TPSG1 LINC00254 RNPS1 FLJ42627 GNPTG NPW PDPK1 TPSAB1 PGP HBZ TRAF7 NARFL MIR3176 NTHL1 TSC2 TBL3 ERVK13-1 HBQ1 MRPS34 DDX11L10 LOC101929280 MLST8 DNASE1L2 LOC100287175 FAM173A BAIAP3 HS3ST6 PRR25 LOC107987233 MIR662 MIR1225 CASKIN1 HBA2 IFT140 LINC00235 WFIKKN1 PKD1 FAHD1 LOC105371049 RHOT2 SYNGR3 MIR6511B1 HAGHL FBXL16 E4F1 PRSS29P PRSS27 EME2 MEIOB LMF1 ECI1 RHBDF1 HBM TPSB2 ABCA3 LOC105371184 NHLRC4 C16orf59 PTX4 HN1L LMF1-AS1 LOC105371045 LUC7L SSTR5-AS1 LOC105371046 SNORA10 ARHGDIG WDR24 LOC652276 MIR3178 UBE2I PDIA2 MIR6859-4 MSLN MIR6768 LOC100134368 RAB40C MSRB1 SNHG19 RGS11 TSR3 STUB1 UNKL MPG CACNA1H SPSB3
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss PRSS33 ERVK13-1 LOC652276 MIR3178 TCEB2 PRSS41 PRSS27 ATP6V0C PDPK1 TBC1D24 KCTD5 PRSS21 CEMP1 AMDHD2 SRRM2 SRRM2-AS1 FLJ42627
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss ERVK13-1 LOC652276 MIR3178 CEMP1 ATP6V0C AMDHD2 PDPK1 TBC1D24 FLJ42627
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain LOC106660606 RAB26 MIR6511B1 NTN3 E4F1 ATP6V0C BRICD5 PDPK1 MIR4516 ECI1 TBC1D24 PGP ABCA3 TRAF7 CEMP1 MIR4717 C16orf59 AMDHD2 TSC2 LOC729652 LOC652276 MIR3178 MIR3180-5 MLST8 DNASE1L2 SNORD60 MIR6768 MIR3677 SNHG19 MIR940 MIR6767 MIR1225 CASKIN1 CCNF ABCA17P RNPS1 PKD1 LOC105371049

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