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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154508305 on build GRCh38
Cytoband
Xq28
Assay ID Hs01552819_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK124890.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss G6PD IRAK1 RAB39B SMIM9 H2AFB1 FUNDC2 MIR1184-3 LOC107987332 TKTL1 CTAG1A MIR6858 MIR1184-1 CMC4 CLIC2 CTAG1B OPN1LW MIR1184-2 MIR3202-1 TEX28 F8A2 MIR664B PLXNA3 BRCC3 RPL10 SLC10A3 VBP1 DKC1 HCFC1-AS1 CH17-340M24.3 LOC101927830 TMEM187 SNORA70 UBL4A MIR718 LAGE3 H2AFB2 GDI1 DNASE1L1 H2AFB3 GAB3 F8A1 MTCP1 OPN1MW FAM223B FAM223A MPP1 OPN1MW2 FAM3A CTAG2 MIR3202-2 F8 LOC105373386 TAZ F8A3 SNORA36A FAM50A EMD HCFC1 SNORA56 MECP2 SPRY3 IKBKG TMLHE-AS1 TMLHE ATP6AP1 OPN1MW3 FLNA
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain G6PD GDI1 LOC107987332 TKTL1 CTAG1A DNASE1L1 MIR6858 OPN1LW OPN1MW FAM223A OPN1MW2 TEX28 FAM3A PLXNA3 RPL10 SLC10A3 LOC105373386 TAZ CH17-340M24.3 FAM50A EMD SNORA70 MECP2 UBL4A IKBKG ATP6AP1 LAGE3 OPN1MW3 FLNA
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss G6PD IRAK1 BGN LOC107983954 LOC107987332 TKTL1 CTAG1A MIR6858 PDZD4 OPN1LW RENBP MAGEA1 ZNF275 MIR3202-1 PNMA6A TEX28 PNCK SLC6A8 PLXNA3 RPL10 SLC10A3 FAM58A HCFC1-AS1 CH17-340M24.3 ZFP92 L1CAM LOC105373377 TMEM187 SNORA70 UBL4A LCA10 AVPR2 NAA10 MIR718 LAGE3 LOC105373378 GDI1 SSR4 DNASE1L1 BCAP31 IDH3G LOC105373381 OPN1MW FAM223A OPN1MW2 ABCD1 FAM3A MIR3202-2 PLXNB3 LOC105373386 ARHGAP4 TAZ DUSP9 TREX2 FAM50A EMD HCFC1 MECP2 HAUS7 LOC105373383 IKBKG SRPK3 ATP6AP1 OPN1MW3 ATP2B3 FLNA
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion G6PD FAM3A CTAG1A IKBKG FAM223A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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