Hs01565934_cn

• Gene Symbol: FHOD1
• Assay Reference Genome Location: Chr.16:67236564 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 29109
• Gene Name: formin homology 2 domain containing 1
• Gene Aliases: FHOS
• Location: Chr.16:67229389-67247522 on Build GRCh38
• Assay Gene Location: Overlaps Intron 13 - Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FHOD1	NM_001318202.1			NP_001305131.1
	NM_013241.2			NP_037373.2
	XM_006721180.1			XP_006721243.1
	XM_011523043.2			XP_011521345.1
	XM_011523044.1			XP_011521346.1
	XM_011523045.2			XP_011521347.1
	AB041046.1			BAD06250.1
	AB209584.1			BAD92821.1
	AF113615.1			AAD39906.1
	AK301157.1
	AK304232.1
	AY192154.1			AAO38757.1
	BC033084.1			AAH33084.1
	KJ658417.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	LCAT ATP6V0D1 NRN1L HSF4 TSNAXIP1 SLC12A4 GFOD2 DDX28 THAP11 FHOD1 MIR328 ACD LOC107984813 NOL3 E2F4 SLC9A5 EDC4 PSKH1 LOC100131303 TMEM208 CTRL HSD11B2 DUS2 PARD6A PLEKHG4 ELMO3 KIAA0895L ZDHHC1 LRRC36 CENPT CTCF LRRC29 EXOC3L1 LOC100505942 TPPP3 KCTD19 AGRP FAM65A PSMB10 ENKD1 CARMIL2 FBXL8 RANBP10 C16orf86 NUTF2 DPEP2 TRADD DPEP3 LOC105369155
nsv952044	Chr.16:67141198 - 67244397 on Build GRCh38	Deletion	MIR328 NOL3 ELMO3 E2F4 HSF4 KIAA0895L FBXL8 C16orf70 TRADD LRRC29 TMEM208 EXOC3L1 FHOD1 B3GNT9 LOC105369155
nsv827707	Chr.16:67148355 - 67289296 on Build GRCh38	Loss	MIR328 NOL3 PLEKHG4 ELMO3 E2F4 HSF4 KIAA0895L SLC9A5 FBXL8 C16orf70 TRADD LRRC29 TMEM208 EXOC3L1 FHOD1 B3GNT9 LOC105369155
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	LCAT ATP6V0D1 NRN1L HSF4 TSNAXIP1 SLC12A4 GFOD2 DDX28 THAP11 FHOD1 MIR328 ACD LOC107984813 NOL3 E2F4 SLC9A5 EDC4 PSKH1 LOC100131303 TMEM208 CTRL HSD11B2 DUS2 PARD6A PLEKHG4 ELMO3 KIAA0895L ZDHHC1 LRRC36 C16orf70 CENPT CTCF LRRC29 EXOC3L1 B3GNT9 LOC100505942 TPPP3 KCTD19 AGRP FAM65A PSMB10 ENKD1 CARMIL2 FBXL8 RANBP10 C16orf86 NUTF2 DPEP2 TRADD DPEP3 LOC105369155
nsv471092	Chr.16:67174030 - 67518392 on Build GRCh38	Gain	MIR328 ATP6V0D1 NOL3 PLEKHG4 ELMO3 E2F4 KIAA0895L SLC9A5 ZDHHC1 LRRC36 LRRC29 TMEM208 EXOC3L1 HSD11B2 FHOD1 LOC100505942 TPPP3 KCTD19 AGRP LOC105369155
nsv572905	Chr.16:67181417 - 67282697 on Build GRCh38	Loss	MIR328 PLEKHG4 ELMO3 E2F4 LRRC29 TMEM208 EXOC3L1 KIAA0895L SLC9A5 FHOD1 LOC105369155

More Information

Additional Information:

For this assay, SNP(s) [rs77007840] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of transcription from RNA polymerase II promoter
positive regulation of stress fiber assembly

Function(s)

actin binding
protein binding
identical protein binding