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See other RTEL1 CNV Assays ›
Gene Symbol
RTEL1
Assay Reference Genome
Location

Chr.20:63662597 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01572360_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51750

Gene Name:

 regulator of telomere elongation helicase 1

Gene Aliases:

 C20orf41, DKCA4, DKCB5, NHL, PFBMFT3, RTEL

Location:

 Chr.20:63657810-63696253 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 5 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1 NM_001283009.1 NP_001269938.1
NM_001283010.1 NP_001269939.1
NM_016434.3 NP_057518.1
NM_032957.4 NP_116575.3
AF217795.1 AAF33687.1
AK299332.1
AK302508.1
AK304798.1
JX119186.1

Target Gene Details

Entrez Gene ID:

 100533107

Gene Name:

 RTEL1-TNFRSF6B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.20:63657810-63698698 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RTEL1-TNFRSF6B NR_037882.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ZGPAT ZBTB46-AS1 STMN3 SLC2A4RG LIME1 ZBTB46 TNFRSF6B ARFRP1 RTEL1 RTEL1-TNFRSF6B
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ZGPAT STMN3 SLC2A4RG LIME1 ZBTB46 TNFRSF6B ARFRP1 RTEL1 RTEL1-TNFRSF6B
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss ZGPAT LKAAEAR1 STMN3 SLC2A4RG LIME1 MYT1 TPD52L2 MIR941-3 ZNF512B ARFRP1 RTEL1-TNFRSF6B PCMTD2 ZBTB46-AS1 UCKL1-AS1 LINC00266-1 ZBTB46 NPBWR2 UCKL1 C20orf181 MIR6813 MIR941-5 LINC00176 MIR941-4 GMEB2 MIR647 MIR1914 LOC100505771 TNFRSF6B SAMD10 TCEA2 RGS19 MIR941-2 DNAJC5 PRPF6 RTEL1 OPRL1 ABHD16B SOX18 MIR941-1
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss ZGPAT STMN3 SLC2A4RG GMEB2 LIME1 FNDC11 LOC100505771 TNFRSF6B ARFRP1 RTEL1-TNFRSF6B EEF1A2 PTK6 SRMS ZBTB46 PPDPF RTEL1 HELZ2
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss ZGPAT STMN3 SLC2A4RG GMEB2 LIME1 FNDC11 LOC100505771 TNFRSF6B ARFRP1 RTEL1-TNFRSF6B KCNQ2 EEF1A2 PTK6 SRMS ZBTB46 PPDPF RTEL1 HELZ2

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