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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:287905 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01576453_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 11 3195 NP_003493.1
NM_181050.2 10 3087 NP_851393.1
NR_134879.1 9 2990
XM_011522682.2 11 3221 XP_011520984.1
XM_011522683.2 10 3112 XP_011520985.1
XM_011522684.2 11 3071 XP_011520986.1
XM_011522686.1 10 1978 XP_011520988.1
XM_017023743.1 11 3206 XP_016879232.1
XM_017023744.1 10 3097 XP_016879233.1
XM_017023745.1 10 2246 XP_016879234.1
XM_017023746.1 10 2822 XP_016879235.1
AB208876.1 8 5876 BAD92113.1
AF009674.1 11 2921 AAC51624.1
BC017447.1 6 1397 AAH17447.1
BC044648.1 10 2859 AAH44648.1
BX648449.1 2 1323
KF615847.1 11 2166
KF615848.1 10 2058
KF615849.1 7 1682
KF615850.1 3 1611
KF615851.1 6 2014
KF615852.1 9 2990
KF615853.1 6 1064
KF615854.1 6 911

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PGP FLJ42627 HBZ LOC107987233 LOC105371049 SNORA10 LOC105371045 NUBP2 PDPK1 ABCA17P SNHG19 TMEM204 HBA2 WDR90 IGFALS LOC105371184 PTX4 SNORA64 GFER STUB1 GNG13 MIR662 ZNF598 TPSB2 NME3 HS3ST6 RPL23AP5 BRICD5 FBXL16 MIR4717 RAB26 MIR6511B1 KCTD5 MIR6768 RPUSD1 MIR3176 TMEM8A C16orf59 ATP6V0C PRSS29P NPRL3 CCNF DDX11L10 HN1L POLR3K IFT140 MAPK8IP3 MIR940 UBE2I LUC7L SNRNP25 SOX8 SPSB3 LOC105371038 NPW SSTR5 RNF151 LMF1 CASKIN1 HBQ1 BAIAP3 MIR3177 LOC652276 CEMP1 WDR24 C1QTNF8 ERVK13-1 MPG RAB40C PRR35 RHOT2 METTL26 NME4 METRN MEIOB NDUFB10 EME2 TBL3 MIR5587 FAHD1 PIGQ MSLN NARFL SYNGR3 CLCN7 SNORD60 RPL3L MIR4516 RAB11FIP3 TSR3 CAPN15 NTHL1 LOC105371047 HBA1 MLST8 MRPL28 PRR25 RNPS1 SNORA78 LOC107984876 RHBDL1 MIR6767 LOC101929280 WFIKKN1 NTN3 MIR3178 FAM234A NHLRC4 TSC2 HBM RHBDF1 FAM173A SSTR5-AS1 PKD1 DNASE1L2 LINC00254 CHTF18 JMJD8 MIR1225 TPSAB1 ARHGDIG LOC106660606 LOC100134368 UNKL MIR6859-4 LOC105371046 LINC00235 ECI1 RGS11 TPSD1 HAGHL MCRIP2 E4F1 MSRB1 AMDHD2 CCDC78 PDIA2 LOC100287175 LMF1-AS1 RPS2 CRAMP1 SLC9A3R2 NOXO1 ABCA3 MIR3677 PRSS27 TPSG1 CCDC154 C16orf91 SNHG9 CACNA1H MIR3180-5 DECR2 WASIR2 TBC1D24 TELO2 AXIN1 HAGH MRPS34 LOC729652 TRAF7 GNPTG
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain TMEM8A ARHGDIG LOC100134368 MRPL28 RPL23AP5 NME4 DECR2 RAB11FIP3 AXIN1 FAM234A PDIA2 RGS11
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion ARHGDIG AXIN1 PDIA2 RGS11
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG AXIN1 PDIA2
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain ARHGDIG AXIN1 FAM234A PDIA2 RGS11
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss ARHGDIG AXIN1 PDIA2 RGS11
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss TMEM8A ARHGDIG LOC100134368 MRPL28 RPL23AP5 NME4 DECR2 RAB11FIP3 AXIN1 FAM234A PDIA2 RGS11

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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