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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49645359 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01581265_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
AK024444.1
BC011662.2 AAH11662.2
BC053992.1 AAH53992.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss CPT1C ADM5 NOSIP PRMT1 IRF3 PRRG2 MIR5088 SCAF1 RRAS PRR12 BCL2L12
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss CPT1C ADM5 NOSIP PRMT1 IRF3 PRRG2 MIR5088 SCAF1 RRAS PRR12 BCL2L12
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CARD8-AS1 TRPM4 PRMT1 PRRG2 SNAR-G1 CGB7 SLC6A16 C19orf73 PNKP MIR6799 FLT3LG AKT1S1 TEAD2 IZUMO1 MIR150 TULP2 RUVBL2 RASIP1 CCDC114 CGB1 FTL LOC101059948 SCAF1 PTH2 SNAR-A7 FUZ CGB8 CPT1C RPL18 SNAR-A6 TSKS LIN7B C19orf68 SNAR-C4 EMP3 SIGLEC11 MAMSTR ALDH16A1 PPP1R15A CABP5 TMEM143 SEC1P GRWD1 AP2A1 PLEKHA4 SPACA4 SNAR-B2 LOC105372430 SNORD34 CGB3 BSPH1 MIR4324 SYNGR4 SNAR-A1 MIR5088 CYTH2 FUT1 PLA2G4C SNRNP70 SNORD33 DKKL1 SNAR-C3 FCGRT SULT2B1 NUP62 FUT2 SNAR-G2 PTOV1-AS2 IL4I1 RRAS ELSPBP1 CCDC155 SNAR-C2 LOC101928295 SNAR-B1 NUCB1-AS1 GFY BAX KCNA7 DHDH SNORD32A GYS1 RCN3 GRIN2D SNAR-A3 NOSIP SIGLEC16 IRF3 RPL13A HSD17B14 ZNF114 DBP SNAR-D NUCB1 PRR12 SNORD35A ADM5 MIR4751 SNAR-A5 PTOV1 PTOV1-AS1 MIR4750 SNAR-A12 SNAR-C1 CARD8 BCAT2 LHB CA11 FAM83E SNAR-A4 PIH1D1 MED25 SNAR-C5 LOC100287477 ZNF473 NTN5 ATF5 SPHK2 MIR4749 KDELR1 SNORD35B PPFIA3 LMTK3 SNAR-A9 HRC LIG1 TBC1D17 SNAR-A11 VRK3 FLJ26850 SNAR-A14 SNAR-A10 LOC105447645 CGB5 BCL2L12 KCNJ14 PLA2G4C-AS1 FGF21 SNAR-A8 SNAR-A2 CGB2 MIR6798 RPS11 SLC17A7 MIR6800 SNAR-A13 CD37 NTF4
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain AP2A1 PRMT1 IRF3 PTOV1-AS2 SCAF1 MED25 RRAS PRR12 FUZ BCL2L12 MIR4749 CPT1C ADM5 MIR6799 TSKS MIR6800 PTOV1 PTOV1-AS1 MIR5088
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain CPT1C ADM5 NOSIP PRMT1 IRF3 PRRG2 MIR5088 SCAF1 RRAS PRR12 BCL2L12
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion AP2A1 PRMT1 PRRG2 MED25 ATF5 MIR4749 PNKP MIR6799 AKT1S1 MIR5088 TBC1D17 NOSIP IRF3 NUP62 PTOV1-AS2 IL4I1 SCAF1 RRAS PRR12 FUZ BCL2L12 CPT1C ADM5 MIR4751 TSKS MIR6800 PTOV1 PTOV1-AS1 MIR4750
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion AP2A1 PRMT1 SNORD34 PRRG2 MED25 SNORD32A MIR6799 SNORD35B MIR5088 RCN3 MIR150 SNORD33 NOSIP IRF3 FCGRT RPL13A SCAF1 RRAS PRR12 FUZ BCL2L12 SNORD35A CPT1C ADM5 RPS11 TSKS MIR6800 PTOV1-AS1
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss NOSIP PRMT1 IRF3 PRRG2 SCAF1 RRAS PRR12 BCL2L12
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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