Genomic Map
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Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CXCL16 | NM_001100812.1 | 1 | 298 | NP_001094282.1 |
| NM_022059.3 | 1 | 298 | NP_071342.2 | |
| AF301016.1 | 1 | 189 | AAG34365.1 | |
| AK027389.1 | 1 | 216 | BAB55078.1 | |
| AK292114.1 | 1 | 140 | ||
| AK315017.1 | 1 | 298 | ||
| AY358909.1 | 1 | 143 | AAQ89268.1 | |
| BC017588.1 | 1 | 292 | AAH17588.1 | |
| BC044930.1 | AAH44930.1 | |||
| DC373874.1 | 1 | 298 | ||
| JC209418.1 | 1 | 298 | ||
| JC209420.1 | 1 | 298 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain |
 NUP88
RNF167
SCIMP
RABEP1
LOC101928000
MED11
DHX33
PLD2
ALOX15
RPAIN
SLC25A11
MIR6865
PELP1
LOC100130950
LOC400568
USP6
LOC107984973
TM4SF5
LOC102724009
ZFP3
ZMYND15
KIF1C
ZNF232
SPAG7
SMTNL2
CXCL16
CAMTA2
ARRB2
C17orf107
ZNF594
GLTPD2
MINK1
C1QBP
INCA1
PSMB6
PFN1
SLC52A1
VMO1
LOC101927979
GP1BA
ENO3
MIR6864
LOC101559451
CHRNE
|
| nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss |
MED11
CXCL16
ARRB2
PLD2
GLTPD2
MINK1
PELP1
PSMB6
VMO1
LOC107984973
TM4SF5
ZMYND15
LOC101559451
|
| nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion |
MED11
CXCL16
ZMYND15
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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