Hs01596226_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67876510 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC064567.1			AAH64567.1
	BX445706.2
	L26339.1			AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	CENPT LOC105369155 DPEP2 CTRL DDX28 C16orf86 NOL3 EXOC3L1 KIAA0895L LCAT NRN1L ELMO3 LRRC36 TRADD LOC100131303 GFOD2 CARMIL2 RANBP10 PSMB10 PARD6A EDC4 LRRC29 FBXL8 ATP6V0D1 LOC107984813 ENKD1 TMEM208 THAP11 HSF4 AGRP LOC100505942 MIR328 HSD11B2 KCTD19 FAM65A NUTF2 FHOD1 CTCF ACD PLEKHG4 PSKH1 SLC12A4 ZDHHC1 TPPP3 SLC9A5 DUS2 DPEP3 TSNAXIP1 E2F4
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	PSKH1 NRN1L EDC4 NUTF2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	CENPT LOC105369155 DPEP2 CTRL DDX28 C16orf86 NOL3 EXOC3L1 KIAA0895L LCAT NRN1L ELMO3 LRRC36 TRADD LOC100131303 GFOD2 CARMIL2 RANBP10 PSMB10 C16orf70 PARD6A EDC4 LRRC29 FBXL8 ATP6V0D1 LOC107984813 ENKD1 TMEM208 THAP11 HSF4 AGRP LOC100505942 MIR328 HSD11B2 KCTD19 FAM65A NUTF2 FHOD1 CTCF ACD PLEKHG4 PSKH1 SLC12A4 ZDHHC1 B3GNT9 TPPP3 SLC9A5 DUS2 DPEP3 TSNAXIP1 E2F4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding