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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141183018 on build GRCh38
Cytoband
5q31.3
Assay ID Hs01603197_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 1329 NP_066008.2
AB046841.1 1 1620
AF217757.1 1 459 AAF81914.1
AK056460.1 1 634
AY013878.1 1 459 AAK21988.1
BC036062.1 1 608 AAH36062.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB12 PCDHB11 PCDHB16 PCDHB9 PCDHB10
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain LOC101926905 PCDHGA1 PCDHA11 PCDHB15 PCDHB10 PCDHGB2 PCDHGB1 PCDHGA2 PCDHB17P PCDHB7 PCDHGA6 PCDHB5 PCDHGA12 PCDHAC1 PCDHA1 PCDHGA4 PCDHAC2 PCDHGB4 PCDHB14 PCDHA2 TAF7 PCDHA6 PCDHA8 PCDHGB7 PCDHB9 PCDHGB5 PCDHGA11 PCDHB3 PCDHA7 PCDHGA9 PCDHA10 PCDHA4 PCDHA3 PCDHB6 PCDHB12 PCDHGA10 PCDHB18P PCDHGB6 PCDHB11 PCDHB4 PCDHA5 PCDHGA7 PCDHGA8 PCDHGB3 PCDHB19P PCDHB13 PCDHGA3 PCDHGA5 PCDHB1 PCDHA9 SLC25A2 PCDHB2 PCDHA12 PCDHB8 PCDHA13 PCDHGB8P PCDHB16
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB14 PCDHB12 PCDHB13 PCDHB17P PCDHB8 PCDHB7 PCDHB11 PCDHB16 PCDHB9 PCDHB10
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB8 PCDHB7 PCDHB16 PCDHB9 PCDHB10
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB8 PCDHB11 PCDHB16 PCDHB9 PCDHB10
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB19P LOC101926905 PCDHB5 PCDHB3 PCDHB13 PCDHB1 PCDHB15 PCDHB10 PCDHB6 PCDHB14 PCDHB12 SLC25A2 PCDHB2 PCDHB18P TAF7 PCDHB17P PCDHB8 PCDHB7 PCDHB11 PCDHB4 PCDHB16 PCDHB9
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB19P PCDHB5 PCDHB13 PCDHB15 PCDHB10 PCDHB6 PCDHB14 PCDHB12 PCDHB18P PCDHB17P PCDHB8 PCDHB7 PCDHB11 PCDHB4 PCDHB16 PCDHB9
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB17P PCDHB8 PCDHB7 PCDHB16 PCDHB9
nsv1031792 Chr.5:141167591 - 141196668 on Build GRCh38 Loss PCDHB8 PCDHB7 PCDHB16 PCDHB9 PCDHB10
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB12 PCDHB13 PCDHB8 PCDHB7 PCDHB11 PCDHB16 PCDHB9 PCDHB10
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB12 PCDHB8 PCDHB11 PCDHB16 PCDHB9 PCDHB10
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB19P PCDHB13 PCDHB15 PCDHB10 PCDHB6 PCDHB14 PCDHB12 PCDHB18P PCDHB17P PCDHB8 PCDHB7 PCDHB11 PCDHB16 PCDHB9

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