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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141183018 on build GRCh38
Cytoband
5q31.3
Assay ID Hs01603197_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 1329 NP_066008.2
AB046841.1 1 1620
AF217757.1 1 459 AAF81914.1
AK056460.1 1 634
AY013878.1 1 459 AAK21988.1
BC036062.1 1 608 AAH36062.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB10 PCDHB11 PCDHB12 PCDHB9 PCDHB16
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHB3 PCDHA1 PCDHB19P TAF7 PCDHA12 PCDHA13 PCDHGB4 PCDHB10 PCDHGB3 PCDHGA12 LOC101926905 PCDHB5 PCDHA2 PCDHA4 PCDHB2 PCDHB16 PCDHA10 PCDHGA11 PCDHGA5 PCDHB18P PCDHB8 PCDHB1 PCDHGA2 PCDHGA10 SLC25A2 PCDHGA3 PCDHB12 PCDHAC1 PCDHA9 PCDHA8 PCDHGB8P PCDHGA6 PCDHB11 PCDHB14 PCDHGA7 PCDHA6 PCDHA11 PCDHGA8 PCDHAC2 PCDHGB2 PCDHGB1 PCDHA5 PCDHB4 PCDHB13 PCDHGA9 PCDHGB5 PCDHGB6 PCDHB9 PCDHB7 PCDHGA4 PCDHA7 PCDHB15 PCDHB17P PCDHA3 PCDHGA1 PCDHB6 PCDHGB7
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB10 PCDHB11 PCDHB9 PCDHB8 PCDHB16
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB10 PCDHB9 PCDHB8 PCDHB7 PCDHB16
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB13 PCDHB10 PCDHB11 PCDHB12 PCDHB17P PCDHB9 PCDHB14 PCDHB8 PCDHB7 PCDHB16
nsv1024594 Chr.5:141167591 - 141243953 on Build GRCh38 Loss PCDHB13 PCDHB10 PCDHB11 PCDHB12 PCDHB19P PCDHB9 PCDHB18P PCDHB14 PCDHB8 PCDHB7 PCDHB16
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB17P PCDHB9 PCDHB8 PCDHB7 PCDHB16
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB13 PCDHB11 PCDHB19P PCDHB9 PCDHB18P PCDHB14 PCDHB8 PCDHB7 PCDHB15 PCDHB10 PCDHB5 PCDHB12 PCDHB17P PCDHB6 PCDHB4 PCDHB16
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB3 PCDHB13 PCDHB11 PCDHB19P PCDHB9 PCDHB18P PCDHB14 TAF7 PCDHB8 PCDHB7 PCDHB1 PCDHB15 SLC25A2 PCDHB10 LOC101926905 PCDHB5 PCDHB12 PCDHB17P PCDHB6 PCDHB2 PCDHB4 PCDHB16
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB10 PCDHB11 PCDHB12 PCDHB9 PCDHB8 PCDHB16
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB13 PCDHB10 PCDHB11 PCDHB12 PCDHB9 PCDHB8 PCDHB7 PCDHB16
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB13 PCDHB11 PCDHB19P PCDHB9 PCDHB18P PCDHB14 PCDHB8 PCDHB7 PCDHB15 PCDHB10 PCDHB12 PCDHB17P PCDHB6 PCDHB16

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