Hs01605055_cn

• Gene Symbol: ADAT3
• Assay Reference Genome Location: Chr.19:1913416 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 113179
• Gene Name: adenosine deaminase, tRNA specific 3
• Gene Aliases: FWP005, MRT36, MST121, MSTP121, S863-5, TAD3
• Location: Chr.19:1905372-1913447 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADAT3	NM_138422.2			NP_612431.2
	BC011824.1			AAH11824.1

Target Gene Details

• Entrez Gene ID: 113178
• Gene Name: secretory carrier membrane protein 4
• Gene Aliases: SCAMP-4
• Location: Chr.19:1905374-1926013 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCAMP4	NM_079834.2			NP_524558.1
	AK074586.1			BAC11075.1
	AK074967.1			BAC11322.1
	AK092056.1			BAC03797.1
	AK307641.1
	AK307700.1
	BC011747.2			AAH11747.1
	BC016509.1			AAH16509.1
	BC062598.1			AAH62598.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	MKNK2 IZUMO4 MOB3A ADAT3 SCAMP4 ONECUT3 ATP8B3 CSNK1G2 AP3D1 KLF16 BTBD2 CSNK1G2-AS1 LOC100288123 REXO1 ABHD17A MIR1909
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	UQCR11 NDUFS7 C19orf25 MEX3D ADAT3 SCAMP4 TCF3 PCSK4 CSNK1G2-AS1 MUM1 REXO1 GAMT PLK5 DAZAP1 RPS15 ABHD17A ADAMTSL5 MBD3 ONECUT3 ATP8B3 CSNK1G2 REEP6 KLF16 BTBD2 LOC100288123 APC2 MIR1909
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	MKNK2 IZUMO4 MOB3A ADAT3 SCAMP4 ATP8B3 CSNK1G2 KLF16 BTBD2 CSNK1G2-AS1 LOC100288123 REXO1 ABHD17A MIR1909
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	LOC100288123 REXO1 ADAT3 SCAMP4 ATP8B3 ABHD17A MIR1909 KLF16
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	UQCR11 NDUFS7 C19orf25 MEX3D ADAT3 SCAMP4 TCF3 PCSK4 CSNK1G2-AS1 MUM1 REXO1 GAMT PLK5 DAZAP1 RPS15 ABHD17A MKNK2 ADAMTSL5 MBD3 ONECUT3 ATP8B3 CSNK1G2 REEP6 KLF16 BTBD2 LOC100288123 APC2 MIR1909
nsv1160561	Chr.19:1884553 - 2003982 on Build GRCh38	Deletion	BTBD2 CSNK1G2-AS1 ADAT3 SCAMP4 CSNK1G2 ABHD17A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

deaminase, transfer/carrier protein

Gene Ontology Categories:

Process(es)

tRNA modification
RNA modification
protein transport

Function(s)

zinc ion binding
deaminase activity