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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:822544 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01615854_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 5 837 NP_065109.1
XM_006718265.3 5 843 XP_006718328.1
XM_006718266.3 4 783 XP_006718329.1
XM_017018028.1 4 783 XP_016873517.1
AF055000.1 3 355 AAC09354.1
AJ278475.1 5 706 CAC01131.1
AJ278476.1 4 726 CAC01132.1
AK308435.1
AY203925.1 3 1241 AAP34448.1
AY894804.1 4 634 AAW81962.1
BC011958.1 2 225 AAH11958.1
BC017280.2 5 836 AAH17280.1
HQ651812.1 5 837
JF279441.1 5 837
JF279442.1 5 837
KF601369.1 5 837
KF833264.1 4 634
KF833265.1 4 634

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CHID1 CD151 PNPLA2 TSPAN4 POLR2L LOC171391 PANO1 SLC25A22 SNORA52 CRACR2B PDDC1 RPLP2 CEND1 PIDD1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC143666 MUC2 PNPLA2 ANO9 TALDO1 TSPAN4 POLR2L LOC101927503 MUC5AC LMNTD2 B4GALNT4 SCT SIGIRR RPLP2 CEND1 PIDD1 EPS8L2 TOLLIP CHID1 CD151 DEAF1 MIR210 AP2A2 IRF7 MUC6 TMEM80 DRD4 PKP3 PTDSS2 LOC171391 PANO1 HRAS PHRF1 SLC25A22 MIR6744 SNORA52 CRACR2B RASSF7 LRRC56 MIR210HG CDHR5 MUC5B LOC101059906 PDDC1 RNH1
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain CD151 PNPLA2 CRACR2B TSPAN4 POLR2L RPLP2
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CHID1 CD151 AP2A2 PNPLA2 TSPAN4 POLR2L LOC171391 PANO1 SLC25A22 SNORA52 CRACR2B PDDC1 RPLP2 CEND1 PIDD1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC143666 MUC2 PNPLA2 ANO9 TALDO1 TSPAN4 POLR2L LOC101927503 MUC5AC LMNTD2 SCT SIGIRR RPLP2 CEND1 PIDD1 EPS8L2 TOLLIP CHID1 CD151 DEAF1 MIR210 AP2A2 IRF7 MUC6 TMEM80 DRD4 PTDSS2 LOC171391 PANO1 HRAS PHRF1 SLC25A22 MIR6744 SNORA52 TOLLIP-AS1 CRACR2B RASSF7 LRRC56 MIR210HG CDHR5 MUC5B LOC101059906 PDDC1 RNH1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CHID1 CD151 SNORA52 AP2A2 PNPLA2 CRACR2B TSPAN4 POLR2L RPLP2 PIDD1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC143666 PNPLA2 ANO9 TALDO1 TSPAN4 POLR2L LMNTD2 B4GALNT4 SCT SIGIRR RPLP2 CEND1 PIDD1 EPS8L2 CHID1 CD151 DEAF1 MIR210 AP2A2 IRF7 TMEM80 DRD4 PKP3 PTDSS2 LOC171391 PANO1 HRAS PHRF1 SLC25A22 SNORA52 CRACR2B RASSF7 LRRC56 MIR210HG CDHR5 LOC101059906 PDDC1 RNH1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CHID1 CD151 PNPLA2 TSPAN4 POLR2L LOC171391 PANO1 SLC25A22 SNORA52 CRACR2B PDDC1 RPLP2 CEND1 PIDD1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain LOC171391 PANO1 SLC25A22 CD151 SNORA52 PNPLA2 CRACR2B PDDC1 RPLP2 CEND1 PIDD1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC143666 PNPLA2 TALDO1 TSPAN4 POLR2L LMNTD2 SCT RPLP2 CEND1 PIDD1 EPS8L2 CHID1 CD151 DEAF1 MIR210 IRF7 TMEM80 DRD4 PTDSS2 LOC171391 PANO1 HRAS PHRF1 SLC25A22 SNORA52 CRACR2B RASSF7 LRRC56 MIR210HG CDHR5 LOC101059906 PDDC1 RNH1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CHID1 CD151 PNPLA2 CRACR2B TSPAN4 POLR2L
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CHID1 CD151 PNPLA2 TALDO1 TSPAN4 POLR2L LOC171391 PANO1 SLC25A22 SNORA52 CRACR2B PDDC1 RPLP2 CEND1 PIDD1

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