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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:824590 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01616652_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 NP_065109.1
XM_006718265.3 XP_006718328.1
XM_006718266.3 XP_006718329.1
XM_017018028.1 XP_016873517.1
AF055000.1 AAC09354.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AL833707.1
AY203925.1 AAP34448.1
AY894804.1 AAW81962.1
BC011958.1 AAH11958.1
BC017280.2 AAH17280.1
HQ651812.1
JF279441.1
JF279442.1
KF601369.1
KF833264.1
KF833265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PNPLA2 LOC171391 SLC25A22 CHID1 AP2A2 CEND1 POLR2L PANO1 PDDC1 CD151 PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC2 MIR210 PTDSS2 PNPLA2 MIR210HG LOC171391 SLC25A22 CHID1 IRF7 HRAS TOLLIP-AS1 DRD4 TMEM80 POLR2L LMNTD2 LOC101927503 TALDO1 CD151 RNH1 LOC101059906 MUC5AC SIGIRR RASSF7 LRRC56 LOC143666 EPS8L2 AP2A2 TOLLIP CEND1 MIR6744 DEAF1 CDHR5 MUC5B PANO1 PDDC1 PHRF1 ANO9 SCT PIDD1 RPLP2 MUC6 TSPAN4 SNORA52 CRACR2B
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion MIR210 PTDSS2 PNPLA2 MIR210HG LOC171391 SLC25A22 CHID1 IRF7 HRAS DRD4 TMEM80 POLR2L LMNTD2 TALDO1 CD151 RNH1 LOC101059906 B4GALNT4 SIGIRR RASSF7 PKP3 LRRC56 LOC143666 EPS8L2 AP2A2 CEND1 DEAF1 CDHR5 PANO1 PDDC1 PHRF1 ANO9 SCT PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PANO1 PNPLA2 PDDC1 LOC171391 SLC25A22 CD151 PIDD1 RPLP2 CEND1 SNORA52 CRACR2B
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion MIR210 PTDSS2 PNPLA2 MIR210HG LOC171391 SLC25A22 CHID1 IRF7 HRAS DRD4 TMEM80 POLR2L LMNTD2 TALDO1 CD151 RNH1 LOC101059906 RASSF7 LRRC56 LOC143666 EPS8L2 CEND1 DEAF1 CDHR5 PANO1 PDDC1 PHRF1 SCT PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PNPLA2 LOC171391 SLC25A22 CHID1 CEND1 POLR2L PANO1 PDDC1 CD151 PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 MIR210 PTDSS2 PNPLA2 MIR210HG LOC171391 SLC25A22 CHID1 IRF7 HRAS DRD4 TMEM80 POLR2L LMNTD2 LOC101927503 TALDO1 CD151 RNH1 LOC101059906 MUC5AC B4GALNT4 SIGIRR RASSF7 PKP3 LRRC56 LOC143666 EPS8L2 AP2A2 TOLLIP CEND1 MIR6744 DEAF1 CDHR5 MUC5B PANO1 PDDC1 PHRF1 ANO9 SCT PIDD1 RPLP2 MUC6 TSPAN4 SNORA52 CRACR2B
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain POLR2L PNPLA2 CD151 RPLP2 TSPAN4 CRACR2B
nsv552874 Chr.11:823590 - 843713 on Build GRCh38 Gain POLR2L PNPLA2 CD151 TSPAN4 CRACR2B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L PNPLA2 CD151 CHID1 AP2A2 PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PNPLA2 LOC171391 SLC25A22 CHID1 CEND1 POLR2L PANO1 PDDC1 CD151 PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L PNPLA2 CD151 CHID1 TSPAN4 CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PNPLA2 LOC171391 SLC25A22 CHID1 CEND1 POLR2L PANO1 TALDO1 PDDC1 CD151 PIDD1 RPLP2 TSPAN4 SNORA52 CRACR2B

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