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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31660303 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01635811_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 470 NP_067007.3
AJ245433.1 1 431 CAB51603.1
AK315349.1 1 159
BC012950.1 1 470 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion CSNK2B LY6G5C PRRC2A CYP21A1P HCP5 PPT2-EGFL8 CLIC1 NFKBIL1 AIF1 C6orf25 NCR3 SNORA38 TNXB LY6G6F LY6G6E LST1 MICB NOTCH4 BTNL2 LSM2 MIR6833 PBX2 BAG6 PRRT1 TNF APOM VWA7 TNXA FKBPL SKIV2L HSPA1L HLA-DRB5 PPT2 EHMT2 HLA-DRA MIR6721 CFB SAPCD1-AS1 AGER ATP6V1G2-DDX39B LTA MSH5-SAPCD1 MIR6832 LOC100287329 CYP21A2 HCG23 LY6G5B C6orf10 LOC101929163 ATF6B DDX39B SNORD117 HSPA1B STK19 HSPA1A DDAH2 LY6G6D RNF5 SAPCD1 NEU1 LY6G6C SNORD84 SNORD48 MCCD1 LTB AGPAT1 SLC44A4 NELFE C6orf47 HLA-DRB1 ZBTB12 MSH5 HLA-DRB6 EGFL8 C2-AS1 C6orf48 C4A DDX39B-AS1 DXO LOC100507547 SNORD52 LOC102725068 GPANK1 ABHD16A C2 C4B ATP6V1G2 HCG26 GPSM3 VARS MIR1236 MIR4646
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss PRRC2A C6orf47 MIR6832 GPANK1 BAG6 AIF1 SNORA38 APOM
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss CSNK2B LY6G5C PRRC2A CYP21A1P HCP5 CLIC1 NFKBIL1 AIF1 C6orf25 NCR3 SNORA38 TNXB LY6G6F LY6G6E LST1 MICA MICB LSM2 HLA-B BAG6 MIR6891 TNF APOM VWA7 TNXA SKIV2L HSPA1L EHMT2 CFB SAPCD1-AS1 ATP6V1G2-DDX39B LTA MSH5-SAPCD1 MIR6832 LOC100287329 CYP21A2 LY6G5B DDX39B SNORD117 HSPA1B STK19 HSPA1A DDAH2 LY6G6D SAPCD1 NEU1 LY6G6C SNORD84 SNORD48 MCCD1 LTB SLC44A4 NELFE C6orf47 ZBTB12 MSH5 C2-AS1 C6orf48 C4A DDX39B-AS1 DXO SNORD52 LOC102725068 GPANK1 ABHD16A C2 C4B ATP6V1G2 HCG26 VARS MIR1236 MIR4646
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PRRC2A HLA-DOB HLA-DQA2 HCP5 HSD17B8 NFKBIL1 AIF1 PFDN6 C6orf25 NCR3 SNORA38 TNXB LY6G6E LST1 MICB LSM2 MIR6833 BAG6 PRRT1 TNF VPS52 DAXX TAPBP FKBPL HSPA1L PPT2 MIR3135B EHMT2 CFB HLA-DPA1 AGER HLA-DOA MSH5-SAPCD1 HCG23 MIR5004 ATF6B ZBTB9 MIR6873 MIR219A1 HSPA1B PPP1R2P1 STK19 DDAH2 LY6G6D LY6G6C HLA-DQB1 SNORD84 SNORD48 SLC44A4 NELFE C6orf47 ZBTB12 MSH5 HLA-DQA1 HLA-DRB6 EGFL8 C2-AS1 DXO SYNGAP1 TAP1 LOC100507547 HLA-DQB1-AS1 C2 C4B HLA-DPB1 HCG26 MIR6834 PSMB8-AS1 HLA-DQB2 RXRB COL11A2 MIR1236 MIR4646 CSNK2B LY6G5C CYP21A1P PPT2-EGFL8 CLIC1 HLA-DMB LY6G6F PSMB8 NOTCH4 BTNL2 PBX2 PHF1 APOM VWA7 TNXA B3GALT4 PSMB9 SKIV2L BRD2 SLC39A7 HLA-DRB5 HCG24 ZBTB22 HLA-DRA MIR6721 SAPCD1-AS1 KIFC1 ATP6V1G2-DDX39B LTA MIR6832 LOC100287329 CYP21A2 RGL2 LY6G5B RING1 C6orf10 LOC101929163 LOC100294145 DDX39B SNORD117 HSPA1A TAP2 HLA-DMA HLA-DPB2 RNF5 SAPCD1 NEU1 RPS18 WDR46 MCCD1 LTB AGPAT1 HLA-DRB1 C6orf48 C4A DDX39B-AS1 SNORD52 LOC102725068 GPANK1 ABHD16A ATP6V1G2 HCG25 GPSM3 CUTA VARS
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PRRC2A HLA-DOB HLA-DQA2 HCP5 HSD17B8 NFKBIL1 AIF1 PFDN6 C6orf25 NCR3 SNORA38 TNXB LY6G6E LST1 MICB LSM2 MIR6833 BAG6 PRRT1 TNF VPS52 DAXX TAPBP FKBPL HSPA1L PPT2 MIR3135B EHMT2 CFB HLA-DPA1 AGER HLA-DOA MSH5-SAPCD1 HCG23 MIR5004 ATF6B ZBTB9 MIR6873 MIR219A1 HSPA1B PPP1R2P1 STK19 DDAH2 LY6G6D LY6G6C HLA-DQB1 SNORD84 SNORD48 SLC44A4 NELFE C6orf47 ZBTB12 MSH5 HLA-DQA1 HLA-DRB6 EGFL8 C2-AS1 DXO SYNGAP1 TAP1 LOC100507547 HLA-DQB1-AS1 C2 C4B HLA-DPB1 HCG26 MIR6834 PSMB8-AS1 HLA-DQB2 RXRB COL11A2 MIR1236 MIR4646 CSNK2B LY6G5C CYP21A1P PPT2-EGFL8 CLIC1 HLA-DMB LY6G6F PSMB8 NOTCH4 BTNL2 PBX2 PHF1 APOM VWA7 TNXA B3GALT4 PSMB9 SKIV2L BRD2 SLC39A7 HLA-DRB5 HCG24 ZBTB22 HLA-DRA MIR6721 SAPCD1-AS1 KIFC1 ATP6V1G2-DDX39B LTA MIR6832 LOC100287329 CYP21A2 RGL2 LY6G5B RING1 C6orf10 LOC101929163 LOC100294145 DDX39B SNORD117 HSPA1A TAP2 HLA-DMA HLA-DPB2 RNF5 SAPCD1 NEU1 RPS18 WDR46 MCCD1 LTB AGPAT1 HLA-DRB1 C6orf48 C4A DDX39B-AS1 SNORD52 LOC102725068 GPANK1 ABHD16A ATP6V1G2 HCG25 GPSM3 CUTA VARS
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss CSNK2B LY6G5C PRRC2A CYP21A1P HCP5 PPT2-EGFL8 CLIC1 NFKBIL1 AIF1 C6orf25 NCR3 SNORA38 TNXB LY6G6F LY6G6E LST1 MICA MICB NOTCH4 BTNL2 LSM2 MIR6833 HLA-B PBX2 BAG6 MIR6891 PRRT1 TNF APOM VWA7 TNXA FKBPL SKIV2L HSPA1L PPT2 EHMT2 HLA-DRA MIR6721 CFB SAPCD1-AS1 AGER ATP6V1G2-DDX39B LTA MSH5-SAPCD1 MIR6832 LOC100287329 CYP21A2 HCG23 LY6G5B C6orf10 LOC101929163 ATF6B DDX39B SNORD117 HSPA1B STK19 HSPA1A DDAH2 LY6G6D RNF5 SAPCD1 NEU1 LY6G6C SNORD84 SNORD48 MCCD1 LTB AGPAT1 SLC44A4 NELFE C6orf47 ZBTB12 MSH5 EGFL8 C2-AS1 C6orf48 C4A DDX39B-AS1 DXO LOC100507547 SNORD52 LOC102725068 GPANK1 ABHD16A C2 C4B ATP6V1G2 HCG26 GPSM3 VARS MIR1236 MIR4646
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion CSNK2B LY6G5C PRRC2A C6orf47 AIF1 SNORA38 LY6G6F LY6G6E MIR6832 GPANK1 ABHD16A BAG6 LY6G5B APOM MIR4646
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss CSNK2B DDX39B LY6G5C PRRC2A SNORD117 NFKBIL1 AIF1 NCR3 SNORA38 LST1 BAG6 SNORD84 MCCD1 TNF APOM LTB C6orf47 DDX39B-AS1 ATP6V1G2-DDX39B LTA MIR6832 LOC100287329 GPANK1 ABHD16A ATP6V1G2 LY6G5B

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