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See other RANBP1 CNV Assays ›
Gene Symbol
RANBP1
Assay Reference Genome
Location

Chr.22:20116876 on build GRCh38
Cytoband
22q11.21
Assay ID Hs01648282_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5902

Gene Name:

 RAN binding protein 1

Gene Aliases:

 HTF9A

Location:

 Chr.22:20115938-20127357 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RANBP1 NM_001278639.1 NP_001265568.1
AK097659.1
CA489474.1
DC397929.1

Target Gene Details

Entrez Gene ID:

 27037

Gene Name:

 tRNA methyltransferase 2 homolog A

Gene Aliases:

 HTF9C

Location:

 Chr.22:20111866-20117305 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRMT2A NM_001257994.1 NP_001244923.1
NM_022727.5 NP_073564.3
NM_182984.4 NP_892029.2
XM_011530139.2 XP_011528441.1
XM_017028770.1 XP_016884259.1
AK057029.1 BAB71349.1
AK304068.1
BC013352.2 AAH13352.2
BC017184.2 AAH17184.2
BC108251.1 AAI08252.1
BI756672.1
BX349795.2
CR456354.1 CAG30240.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain RANBP1 MIR6816 LOC284865 DGCR8 DGCR6L LOC440792 MIR1306 CCDC188 RTN4R MIR3618 TRMT2A MIR1286 LINC00896 ZDHHC8
esv3647284 Chr.22:19985583 - 20137122 on Build GRCh38 Gain MIR1306 TANGO2 RANBP1 MIR3618 TRMT2A MIR6816 MIR185 DGCR8 ARVCF ZDHHC8
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain RANBP1 LOC284865 CDC45 GP1BB MIR185 LOC440792 MIR1306 CCDC188 RTN4R MIR3618 GNB1L UFD1L TBX1 TXNRD2 TANGO2 MIR6816 CLDN5 SEPT5-GP1BB C22orf29 DGCR8 ARVCF DGCR6L LOC101927859 SEPT5 TRMT2A MIR1286 COMT MIR4761 LINC00896 ZDHHC8 LINC00895
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss TANGO2 RANBP1 MIR6816 LOC284865 DGCR8 DGCR6L LOC440792 MIR1306 CCDC188 RTN4R MIR3618 TRMT2A MIR1286 LINC00896 ZDHHC8
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss RANBP1 LOC284865 GP1BB MIR185 LOC440792 MIR1306 CCDC188 RTN4R MIR3618 GNB1L TBX1 TXNRD2 TANGO2 MIR6816 SEPT5-GP1BB C22orf29 DGCR8 ARVCF DGCR6L SEPT5 TRMT2A MIR1286 COMT MIR4761 LINC00896 ZDHHC8
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain RANBP1 LOC284865 GP1BB MIR185 LOC440792 MIR1306 CCDC188 RTN4R MIR3618 GNB1L TBX1 TXNRD2 TANGO2 MIR6816 SEPT5-GP1BB C22orf29 DGCR8 ARVCF DGCR6L SEPT5 TRMT2A MIR1286 COMT MIR4761 LINC00896 ZDHHC8
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain MIR1306 CCDC188 RTN4R RANBP1 MIR3618 TRMT2A MIR6816 MIR1286 LOC284865 LINC00896 DGCR8 ZDHHC8
dgv4481n100 Chr.22:20114567 - 20291605 on Build GRCh38 Gain CCDC188 RTN4R RANBP1 TRMT2A MIR6816 MIR1286 LOC284865 LINC00896 ZDHHC8
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss TANGO2 RANBP1 MIR6816 LOC284865 MIR185 DGCR8 DGCR6L LOC440792 MIR1306 CCDC188 RTN4R MIR3618 TRMT2A MIR1286 LINC00896 ZDHHC8
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion RANBP1 MIR6816 LOC284865 DGCR8 LOC440792 MIR1306 CCDC188 RTN4R MIR3618 TRMT2A MIR1286 LINC00896 ZDHHC8
nsv834133 Chr.22:20029363 - 20176708 on Build GRCh38 Loss MIR1306 CCDC188 TANGO2 RANBP1 MIR3618 TRMT2A MIR6816 MIR185 DGCR8 ZDHHC8
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain TANGO2 RANBP1 MIR6816 C22orf29 LOC284865 MIR185 DGCR8 ARVCF DGCR6L LOC440792 MIR1306 CCDC188 RTN4R MIR3618 GNB1L TRMT2A MIR1286 COMT MIR4761 LINC00896 TBX1 ZDHHC8 TXNRD2

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