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See other RANBP1 CNV Assays ›
Gene Symbol
RANBP1
Assay Reference Genome
Location

Chr.22:20116876 on build GRCh38
Cytoband
22q11.21
Assay ID Hs01648282_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5902

Gene Name:

 RAN binding protein 1

Gene Aliases:

 HTF9A

Location:

 Chr.22:20115938-20127357 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RANBP1 NM_001278639.1 NP_001265568.1
AK097659.1
CA489474.1
DC397929.1

Target Gene Details

Entrez Gene ID:

 27037

Gene Name:

 tRNA methyltransferase 2 homolog A

Gene Aliases:

 HTF9C

Location:

 Chr.22:20111866-20117305 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRMT2A NM_001257994.1 NP_001244923.1
NM_022727.5 NP_073564.3
NM_182984.4 NP_892029.2
XM_011530139.2 XP_011528441.1
XM_017028770.1 XP_016884259.1
AK057029.1 BAB71349.1
AK304068.1
BC013352.2 AAH13352.2
BC017184.2 AAH17184.2
BC108251.1 AAI08252.1
BI756672.1
BX349795.2
CR456354.1 CAG30240.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain RANBP1 MIR1306 DGCR8 LOC440792 LINC00896 TRMT2A MIR1286 MIR6816 RTN4R CCDC188 ZDHHC8 LOC284865 DGCR6L MIR3618
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain MIR1306 CLDN5 LOC440792 LINC00896 TRMT2A MIR6816 UFD1L GP1BB C22orf29 COMT LINC00895 ZDHHC8 LOC284865 MIR185 RANBP1 MIR4761 TXNRD2 TANGO2 DGCR8 MIR1286 LOC101927859 CDC45 RTN4R ARVCF GNB1L CCDC188 TBX1 SEPT5-GP1BB SEPT5 DGCR6L MIR3618
esv3647284 Chr.22:19985583 - 20137122 on Build GRCh38 Gain RANBP1 ARVCF TANGO2 MIR1306 DGCR8 ZDHHC8 TRMT2A MIR6816 MIR3618 MIR185
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain MIR1306 LOC440792 LINC00896 TRMT2A MIR6816 GP1BB C22orf29 COMT ZDHHC8 LOC284865 MIR185 RANBP1 MIR4761 TXNRD2 TANGO2 DGCR8 MIR1286 RTN4R ARVCF GNB1L CCDC188 TBX1 SEPT5-GP1BB SEPT5 DGCR6L MIR3618
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss MIR1306 LOC440792 LINC00896 TRMT2A MIR6816 GP1BB C22orf29 COMT ZDHHC8 LOC284865 MIR185 RANBP1 MIR4761 TXNRD2 TANGO2 DGCR8 MIR1286 RTN4R ARVCF GNB1L CCDC188 TBX1 SEPT5-GP1BB SEPT5 DGCR6L MIR3618
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss RANBP1 TANGO2 MIR1306 DGCR8 LOC440792 LINC00896 TRMT2A MIR1286 MIR6816 RTN4R CCDC188 ZDHHC8 LOC284865 DGCR6L MIR3618
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain RANBP1 CCDC188 MIR1306 DGCR8 LINC00896 ZDHHC8 TRMT2A MIR1286 MIR6816 LOC284865 MIR3618 RTN4R
dgv4481n100 Chr.22:20114567 - 20291605 on Build GRCh38 Gain RANBP1 CCDC188 LINC00896 ZDHHC8 TRMT2A MIR1286 MIR6816 LOC284865 RTN4R
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss RANBP1 TANGO2 MIR1306 DGCR8 LOC440792 LINC00896 TRMT2A MIR1286 MIR6816 RTN4R CCDC188 ZDHHC8 LOC284865 DGCR6L MIR3618 MIR185
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain RANBP1 MIR4761 TXNRD2 TANGO2 MIR1306 DGCR8 LOC440792 LINC00896 TRMT2A MIR1286 MIR6816 RTN4R C22orf29 ARVCF GNB1L CCDC188 TBX1 COMT ZDHHC8 LOC284865 DGCR6L MIR3618 MIR185
nsv834133 Chr.22:20029363 - 20176708 on Build GRCh38 Loss RANBP1 CCDC188 TANGO2 MIR1306 DGCR8 ZDHHC8 TRMT2A MIR6816 MIR3618 MIR185
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion RANBP1 MIR1306 DGCR8 LOC440792 LINC00896 TRMT2A MIR1286 MIR6816 RTN4R CCDC188 ZDHHC8 LOC284865 MIR3618

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