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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2039824 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01676969_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CLCN7 ABCA17P E4F1 SNRNP25 CRAMP1 HBM SPSB3 SYNGR3 RPL23AP5 PDIA2 HN1L ABCA3 RAB40C HBQ1 RNF151 NOXO1 IGFALS NARFL UBE2I ARHGDIG RPL3L JMJD8 C1QTNF8 PRR25 SNHG9 LOC107984876 MRPS34 SNORA10 LOC105371045 LOC729652 FAHD1 STUB1 PRSS27 LOC105371184 LOC100287175 NME4 FBXL16 MIR4717 SNORD60 PGP IFT140 C16orf91 GNPTG HAGHL TSR3 ZNF598 HAGH ECI1 MIR3176 PRR35 LINC00254 PKD1 AMDHD2 PTX4 SLC9A3R2 LOC105371046 TSC2 MEIOB MSLN MAPK8IP3 EME2 WASIR2 GNG13 DECR2 HBA1 SNHG19 RHBDL1 NTHL1 LOC101929280 CASKIN1 MRPL28 RPUSD1 ERVK13-1 SNORA64 TELO2 AXIN1 LUC7L MIR5587 PRSS29P FLJ42627 LOC100134368 NPRL3 FAM234A MSRB1 NHLRC4 RHOT2 C16orf59 CAPN15 MIR940 LOC105371047 WDR24 LOC106660606 PDPK1 WDR90 METTL26 PIGQ MPG SSTR5-AS1 UNKL HS3ST6 SOX8 MIR3677 NPW LINC00235 CCDC154 RPS2 CHTF18 MIR3177 BAIAP3 HBZ MLST8 MIR1225 MIR6859-4 NTN3 MIR6768 RAB11FIP3 CCDC78 POLR3K TPSD1 CACNA1H CCNF SNORA78 HBA2 LOC105371049 LMF1 TBC1D24 MCRIP2 LOC107987233 DNASE1L2 DDX11L10 WFIKKN1 LOC105371038 MIR3180-5 RNPS1 NUBP2 SSTR5 TPSB2 TPSG1 TPSAB1 GFER LOC652276 BRICD5 MIR6767 TMEM204 TMEM8A MIR662 MIR3178 METRN NDUFB10 TRAF7 FAM173A RGS11 NME3 TBL3 CEMP1 MIR4516 ATP6V0C KCTD5 RAB26 LMF1-AS1 MIR6511B1 RHBDF1
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss DNASE1L2 PGP E4F1 MIR940 SYNGR3 ZNF598 ECI1 LOC106660606 PKD1 SLC9A3R2 MIR3180-5 RNPS1 ABCA3 TSC2 MIR3677 NPW NOXO1 GFER BRICD5 SNHG19 NTHL1 CASKIN1 MLST8 MIR1225 TRAF7 TBL3 MIR4516 RAB26 LOC105371049 MIR6511B1 MIR4717 SNORD60
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NTHL1 SYNGR3 MIR1225 ZNF598 SNHG9 SNORA64 NDUFB10 SNORA10 PKD1 SLC9A3R2 HS3ST6 SNORA78 TBL3 TSC2 NPW RNF151 NOXO1 GFER MIR4516 RPS2 LOC105371049 MSRB1 MIR6511B1 RPL3L
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NTHL1 SYNGR3 MIR1225 ZNF598 SNHG9 SNORA64 NDUFB10 SNORA10 PKD1 SLC9A3R2 SNORA78 TBL3 TSC2 NPW RNF151 NOXO1 GFER RPS2 LOC105371049 MIR6511B1

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