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See other SH2D3C CNV Assays ›
Gene Symbol
SH2D3C
Assay Reference Genome
Location

Chr.9:127740313 on build GRCh38
Cytoband
9q34.11
Assay ID Hs01682577_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10044

Gene Name:

 SH2 domain containing 3C

Gene Aliases:

 CHAT, NSP3, PRO34088, SHEP1

Location:

 Chr.9:127738317-127778769 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SH2D3C NM_001142531.1 9 1679 NP_001136003.1
NM_001142532.1 9 1928 NP_001136004.1
NM_001142533.1 8 1816 NP_001136005.1
NM_001142534.1 8 1788 NP_001136006.1
NM_001252334.1 10 2185 NP_001239263.1
NM_005489.3 9 1814 NP_005480.2
NM_170600.2 10 2287 NP_733745.1
XM_005251639.1 9 1795 XP_005251696.1
XM_011518114.1 10 2271 XP_011516416.1
XM_011518115.1 10 2231 XP_011516417.1
XM_011518117.2 8 2907 XP_011516419.1
XM_017014174.1 8 2068 XP_016869663.1
AF124251.1 9 1726 AAD28246.1
AJ420431.1 3 356
AK056068.1 8 1816
AK096983.1 6 1109
AK128287.1 11 2218
AK291393.1 8 1780
AK292041.1 9 1742
AK292718.1 10 2158
AK294386.1 9 1679
AY358089.1 9 1796 AAQ88456.1
AY358440.1 9 1715 AAQ89948.1
BC027962.1 9 1685 AAH27962.1
BC032365.1 10 2162 AAH32365.1
BX647905.1 10 2111 CAI46101.1
CU454732.1 2 163
CU455802.1 2 163

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv12879n54 Chr.9:127731234 - 127824409 on Build GRCh38 Loss LOC102723566 MIR3960 TOR2A TTC16 SH2D3C MIR2861 FPGS ENG CDK9
nsv615371 Chr.9:127735841 - 127787855 on Build GRCh38 Loss MIR3960 SH2D3C MIR2861 CDK9
nsv471323 Chr.9:127727464 - 127845239 on Build GRCh38 Loss LOC102723566 MIR3960 TOR2A TTC16 SH2D3C MIR2861 FPGS ENG CDK9
nsv466571 Chr.9:127707924 - 127774438 on Build GRCh38 Loss TOR2A TTC16 SH2D3C PTRH1 CFAP157

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