Hs01685384_cn

• Gene Symbol: TRPT1
• Assay Reference Genome Location: Chr.11:64224828 on build GRCh38
• Cytoband: 11q13.1

Target Gene Details

• Entrez Gene ID: 83707
• Gene Name: tRNA phosphotransferase 1
• Gene Aliases: -
• Location: Chr.11:64223799-64226254 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRPT1	NM_001033678.3			NP_001028850.2
	NM_001160389.1	4	514	NP_001153861.1
	NM_001160390.1			NP_001153862.1
	NM_001160392.1			NP_001153864.1
	NM_001160393.1			NP_001153865.1
	NM_031472.3			NP_113660.1
	XM_005274345.4			XP_005274402.1
	XM_005274346.4			XP_005274403.1
	XM_005274347.4			XP_005274404.1
	XM_006718706.3			XP_006718769.1
	XM_006718707.3			XP_006718770.1
	XM_017018400.1			XP_016873889.1
	XM_017018401.1			XP_016873890.1
	AK026364.1
	AW771318.1
	AY211494.1			AAO62941.1
	BC005133.2			AAH05133.1
	BG105545.1
	BM982538.1
	BQ672032.1
	BQ674339.1
	DR004975.1	4	412

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1159904	Chr.11:64150129 - 64279169 on Build GRCh38	Deletion	PPP1R14B FERMT3 PLCB3 DNAJC4 NUDT22 BAD GPR137 FKBP2 VEGFB TRPT1 LOC105369340 MACROD1 STIP1
nsv951010	Chr.11:63942829 - 64352128 on Build GRCh38	Deletion	FERMT3 COX8A PLCB3 BAD GPR137 FLRT1 TRMT112 MIR7155 FKBP2 VEGFB TEX40 TRPT1 PRDX5 LOC105369340 ESRRA PPP1R14B DNAJC4 NUDT22 KCNK4-TEX40 KCNK4 CCDC88B OTUB1 MACROD1 NAA40 STIP1
dgv1963n54	Chr.11:64174262 - 64329761 on Build GRCh38	Loss	ESRRA PPP1R14B FERMT3 PLCB3 DNAJC4 NUDT22 KCNK4-TEX40 BAD KCNK4 GPR137 TRMT112 FKBP2 VEGFB TEX40 TRPT1 PRDX5 LOC105369340 STIP1
nsv555187	Chr.11:64185649 - 64260416 on Build GRCh38	Loss	PPP1R14B FERMT3 FKBP2 PLCB3 VEGFB DNAJC4 TRPT1 NUDT22 LOC105369340 STIP1
nsv555184	Chr.11:64156974 - 64275525 on Build GRCh38	Loss	PPP1R14B FERMT3 PLCB3 DNAJC4 NUDT22 BAD GPR137 FKBP2 VEGFB TRPT1 LOC105369340 MACROD1 STIP1
nsv832186	Chr.11:64204788 - 64402587 on Build GRCh38	Loss	ESRRA PPP1R14B FERMT3 PLCB3 DNAJC4 NUDT22 KCNK4-TEX40 BAD KCNK4 GPR137 TRMT112 MIR1237 MIR7155 FKBP2 VEGFB CCDC88B RPS6KA4 TEX40 TRPT1 PRDX5 LOC105369340
nsv469961	Chr.11:64055468 - 64318495 on Build GRCh38	Loss	ESRRA PPP1R14B FERMT3 PLCB3 DNAJC4 NUDT22 KCNK4-TEX40 BAD KCNK4 GPR137 FLRT1 TRMT112 FKBP2 VEGFB TEX40 TRPT1 PRDX5 LOC105369340 MACROD1 STIP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

tRNA splicing, via endonucleolytic cleavage and ligation
regulation of protein kinase activity

Function(s)

tRNA 2'-phosphotransferase activity