Name: [Hs01689481_cn] [NCKIPSD]
Creator: Thermo Fisher Scientific
Keywords: [NCKIPSD] Assay, [NCK interacting protein with SH3 domain] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	51517
Gene Name:	NCK interacting protein with SH3 domain
Gene Aliases:	AF3P21, DIP, DIP1, ORF1, SPIN90, VIP54, WASLBP, WISH
Location:	Chr.3:48663814-48685941 on Build GRCh38
Assay Gene Location:	Within Exon 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NCKIPSD	NM_016453.3	13	2594	NP_057537.1
	NM_184231.2	13	2573	NP_909119.1
	XM_017006594.1			XP_016862083.1
	XM_017006595.1			XP_016862084.1
	XM_017006596.1			XP_016862085.1
	XM_017006597.1			XP_016862086.1
	XM_017006598.1			XP_016862087.1
	XM_017006599.1	13	2614	XP_016862088.1
	XM_017006600.1	13	2577	XP_016862089.1
	AF178432.1	13	2562	AAF35985.1
	AF303581.1	13	2533	AAK09094.1
	AI863106.1
	AJ242655.2			CAB65089.2
	AY453794.1			AAR83735.1
	BC016052.1	13	2457	AAH16052.1
	BC026280.1	13	2524	AAH26280.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834685	Chr.3:48527576 - 48708341 on Build GRCh38	Loss	CELSR3 TMEM89 COL7A1 MIR6824 UCN2 MIR4793 IP6K2 PFKFB4 SNORA94 MIR711 NCKIPSD SLC26A6 CELSR3-AS1 UQCRC1 MIR6823
nsv523981	Chr.3:48478880 - 48683607 on Build GRCh38	Loss	CELSR3 SHISA5 TMEM89 COL7A1 MIR6824 UCN2 MIR4793 PFKFB4 SNORA94 MIR711 NCKIPSD SLC26A6 CELSR3-AS1 UQCRC1 MIR6823
nsv590247	Chr.3:48624552 - 48764496 on Build GRCh38	Loss	MIR4793 CELSR3 IP6K2 PRKAR2A NCKIPSD SLC26A6 CELSR3-AS1 MIR6824
nsv818138	Chr.3:48573492 - 48694054 on Build GRCh38	Gain	MIR4793 CELSR3 IP6K2 TMEM89 SNORA94 MIR711 COL7A1 NCKIPSD SLC26A6 CELSR3-AS1 UQCRC1 MIR6824
nsv590246	Chr.3:48590581 - 48683607 on Build GRCh38	Loss	MIR4793 CELSR3 TMEM89 SNORA94 COL7A1 NCKIPSD SLC26A6 CELSR3-AS1 UQCRC1 MIR6824