Hs01750683_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48030188 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1023	NP_062829.1
	XM_017026992.1	8	1224	XP_016882481.1
	AF169159.1	6	1016	AAF25793.1
	BQ185108.1	1	253

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 PLA2G4C-AS1 C19orf68 ELSPBP1 PLA2G4C CABP5 LIG1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	MIR4751 RPS11 SIGLEC16 NUCB1 SNRNP70 FUT2 PPP1R15A SEC1P LIN7B FUZ LOC101059948 SNAR-C1 SNAR-A4 KDELR1 CCDC114 FAM83E CA11 DHDH CGB3 FUT1 ADM5 PTOV1-AS1 CARD8-AS1 ZNF473 RASIP1 CYTH2 SNAR-A6 CABP5 SULT2B1 CPT1C SNAR-A5 GRIN2D CGB2 SNORD35B SNAR-D BAX PTOV1 FCGRT PLA2G4C SNORD33 CGB5 SNORD35A HSD17B14 PLEKHA4 FGF21 MIR4324 SNORD32A PRMT1 SNAR-A3 TSKS CGB7 C19orf73 ZNF114 AKT1S1 IRF3 DKKL1 PIH1D1 RPL13A TMEM143 LMTK3 SNAR-A13 RCN3 MED25 FLJ26850 MIR6798 LOC105447645 MIR150 GYS1 SNAR-G1 SNAR-C4 TBC1D17 CCDC155 PPFIA3 CGB1 RRAS NTF4 ATF5 TULP2 PRR12 SYNGR4 TRPM4 SNAR-G2 SNAR-B1 TEAD2 C19orf68 SNAR-A2 NOSIP SNAR-C5 SLC17A7 SNAR-A1 BSPH1 SNAR-C3 SIGLEC11 PLA2G4C-AS1 DBP LOC100287477 AP2A1 EMP3 HRC KCNA7 BCL2L12 GRWD1 RUVBL2 PTOV1-AS2 VRK3 ELSPBP1 IZUMO1 NUP62 SPACA4 NTN5 FLT3LG FTL SNAR-C2 MIR4750 SLC6A16 SNAR-A7 LIG1 LHB BCAT2 GFY NUCB1-AS1 SNORD34 SNAR-A11 LOC101928295 CARD8 KCNJ14 MIR4749 SNAR-A9 MAMSTR SNAR-A14 IL4I1 SPHK2 CGB8 SNAR-B2 SNAR-A12 PNKP LOC105372430 MIR6800 RPL18 SNAR-A8 SCAF1 CD37 MIR6799 PRRG2 SNAR-A10 MIR5088 ALDH16A1 PTH2
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 C19orf68 ELSPBP1 CARD8 CABP5 GRIN2D ZNF114 PLA2G4C-AS1 PLA2G4C EMP3 KDELR1 CCDC114 LIG1 SYNGR4 TMEM143
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A13 SNAR-A12 SNAR-A2 ELSPBP1 CABP5 SNAR-C5 SULT2A1 SNAR-C4 TPRX1 SNAR-A1 SNAR-A3 BSPH1 SNAR-C3 SNAR-C1 LINC01595 SNAR-C2 CRX
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A13 SNAR-A12 SNAR-A2 ELSPBP1 CABP5 SNAR-C5 SULT2A1 SNAR-C4 TPRX1 SNAR-A1 SNAR-A3 BSPH1 SNAR-C3 SNAR-C1 LINC01595 PLA2G4C-AS1 SNAR-C2 CRX PLA2G4C

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding