Hs01750683_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48030188 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1023	NP_062829.1
	XM_017026992.1	8	1224	XP_016882481.1
	AF169159.1	6	1016	AAF25793.1
	BQ185108.1	1	253

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 C19orf68 PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	TBC1D17 RPL18 IZUMO1 SCAF1 SPACA4 ADM5 CCDC114 BSPH1 MIR4751 LOC100287477 BCL2L12 FLT3LG FAM83E BCAT2 MIR4324 MIR4749 CGB1 MIR6798 LIN7B SYNGR4 SNAR-C2 ZNF114 MIR6800 TRPM4 SNORD34 CGB3 MIR5088 SNAR-A5 KCNJ14 SNORD33 SIGLEC16 SNRNP70 IRF3 EMP3 RPL13A NUP62 GRIN2D HSD17B14 LOC101928295 C19orf73 MIR6799 PRR12 SNAR-A4 MIR4750 SNAR-G1 SNAR-A7 PLA2G4C-AS1 LOC101059948 FGF21 CA11 CPT1C PRMT1 SNORD32A SNAR-A2 PIH1D1 SNAR-A10 DKKL1 VRK3 LHB AP2A1 SIGLEC11 CD37 SLC6A16 SNAR-C3 SNAR-C1 SNAR-B2 MED25 LOC105372430 IL4I1 GYS1 SNAR-A12 PRRG2 PTOV1 SEC1P ATF5 CARD8 FLJ26850 FUT2 SNAR-D CCDC155 KCNA7 FUZ PTOV1-AS2 SNAR-A3 CARD8-AS1 CGB2 SNORD35A RRAS SNAR-A8 LOC105447645 ALDH16A1 SNAR-C5 PLA2G4C FTL ELSPBP1 SNAR-B1 BAX GFY SULT2B1 SPHK2 MAMSTR PTH2 HRC SNAR-A1 SNAR-G2 NUCB1 NTN5 PTOV1-AS1 SNAR-A6 PPFIA3 DHDH PPP1R15A SLC17A7 RASIP1 SNAR-C4 PNKP TSKS CYTH2 NUCB1-AS1 CGB7 RPS11 NTF4 AKT1S1 TMEM143 MIR150 RUVBL2 DBP FCGRT CABP5 FUT1 SNORD35B LIG1 LMTK3 CGB5 TULP2 PLEKHA4 KDELR1 SNAR-A13 ZNF473 TEAD2 SNAR-A11 CGB8 C19orf68 GRWD1 NOSIP SNAR-A14 SNAR-A9 RCN3
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	LIG1 PLA2G4C ELSPBP1 SYNGR4 ZNF114 CCDC114 KDELR1 CARD8 TMEM143 C19orf68 PLA2G4C-AS1 EMP3 CABP5 GRIN2D CARD8-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-C5 ELSPBP1 SNAR-A12 SNAR-C4 SNAR-C2 SULT2A1 TPRX1 SNAR-A13 BSPH1 SNAR-A2 CRX SNAR-A1 SNAR-A3 CABP5 SNAR-C3 SNAR-C1 LINC01595
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C5 PLA2G4C ELSPBP1 SNAR-A12 SNAR-C4 SNAR-C2 SULT2A1 TPRX1 SNAR-A13 BSPH1 SNAR-A2 CRX PLA2G4C-AS1 SNAR-A1 SNAR-A3 CABP5 SNAR-C3 SNAR-C1 LINC01595

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding