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Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2038078 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01762875_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 7 1246 NP_001123484.1
NM_001252073.1 6 863 NP_001239002.1
NM_001252075.1 6 857 NP_001239004.1
NM_001252076.1 6 830 NP_001239005.1
NM_004785.5 7 1213 NP_004776.3
XM_005255702.4 6 1926 XP_005255759.1
XM_006720981.1 6 2723 XP_006721044.1
XM_017023894.1 6 1816 XP_016879383.1
XM_017023895.1 7 1101 XP_016879384.1
AF004900.1 7 1124 AAC63061.1
AF035771.1 7 1108 AAC52090.1
BC014513.1 7 1219 AAH14513.2
BC069014.1 7 1215 AAH69014.1
BC106001.1 7 1222 AAI06002.1
BQ687174.1 6 708
BX377861.2
U82108.1 7 1166 AAB53042.1
Z50150.1 7 1201 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SYNGR3 RPL23AP5 LOC107987233 RAB40C SSTR5-AS1 MIR662 NHLRC4 RHOT2 MIR3176 ERVK13-1 LMF1-AS1 BAIAP3 SPSB3 FAM234A LOC101929280 HBZ NME4 LOC100287175 AMDHD2 MCRIP2 E4F1 PTX4 MIR6511B1 RGS11 SNORA78 ZNF598 PRR25 SNHG9 PIGQ LOC105371049 ARHGDIG CCDC78 NPW DNASE1L2 PKD1 MAPK8IP3 WDR90 AXIN1 ECI1 NOXO1 TPSAB1 HBA2 PGP MEIOB MIR3677 HN1L FAM173A MIR6768 MIR3180-5 LOC107984876 METRN DECR2 KCTD5 LOC106660606 CRAMP1 TRAF7 TMEM204 WFIKKN1 FAHD1 MLST8 JMJD8 FLJ42627 TPSG1 BRICD5 MIR1225 CCNF GNPTG RAB26 RAB11FIP3 WDR24 TMEM8A MSRB1 LUC7L MIR4516 NPRL3 FBXL16 RHBDF1 MSLN POLR3K C1QTNF8 HBA1 SNORA10 TBL3 TPSB2 MIR3177 SNORD60 SNHG19 MIR940 CCDC154 SNRNP25 PDPK1 UBE2I LINC00235 CHTF18 LOC652276 LOC105371047 LMF1 RHBDL1 SLC9A3R2 RPL3L RPS2 TSR3 RPUSD1 CLCN7 LOC105371038 CAPN15 DDX11L10 LOC729652 WASIR2 C16orf59 NTN3 SNORA64 PRSS27 LOC105371184 NTHL1 UNKL LOC105371045 MRPS34 TPSD1 NDUFB10 C16orf91 EME2 LOC100134368 ABCA3 METTL26 TSC2 TELO2 PDIA2 GNG13 LINC00254 SSTR5 MIR6767 NARFL HAGH IFT140 LOC105371046 PRR35 IGFALS HBQ1 MIR6859-4 ATP6V0C CACNA1H NUBP2 MIR4717 HS3ST6 MRPL28 MIR3178 PRSS29P CEMP1 ABCA17P CASKIN1 NME3 RNF151 GFER MIR5587 HBM RNPS1 SOX8 STUB1 TBC1D24 HAGHL MPG
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss GFER TBL3 TSC2 SYNGR3 SLC9A3R2 ZNF598 NTHL1 NOXO1 NPW
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNORA10 TBL3 MIR6511B1 TSC2 SYNGR3 SNORA78 SLC9A3R2 ZNF598 RPL3L HS3ST6 SNHG9 RPS2 LOC105371049 MIR1225 NPW RNF151 PKD1 GFER SNORA64 MSRB1 MIR4516 NTHL1 NOXO1 NDUFB10
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA10 TBL3 SYNGR3 SNORA78 SLC9A3R2 ZNF598 SNHG9 RPS2 NPW RNF151 GFER SNORA64 NOXO1 NDUFB10
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA10 TBL3 MIR6511B1 TSC2 SYNGR3 SNORA78 SLC9A3R2 ZNF598 SNHG9 RPS2 LOC105371049 MIR1225 NPW RNF151 PKD1 GFER SNORA64 NTHL1 NOXO1 NDUFB10
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss GFER TBL3 SYNGR3 SNORA78 SLC9A3R2 ZNF598 SNHG9 NOXO1 NPW RNF151
dgv779e212 Chr.16:2037225 - 2038968 on Build GRCh38 Loss SLC9A3R2

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