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Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2038078 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01762875_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 7 1246 NP_001123484.1
NM_001252073.1 6 863 NP_001239002.1
NM_001252075.1 6 857 NP_001239004.1
NM_001252076.1 6 830 NP_001239005.1
NM_004785.5 7 1213 NP_004776.3
XM_005255702.4 6 1926 XP_005255759.1
XM_006720981.1 6 2723 XP_006721044.1
XM_017023894.1 6 1816 XP_016879383.1
XM_017023895.1 7 1101 XP_016879384.1
AF004900.1 7 1124 AAC63061.1
AF035771.1 7 1108 AAC52090.1
BC014513.1 7 1219 AAH14513.2
BC069014.1 7 1215 AAH69014.1
BC106001.1 7 1222 AAI06002.1
BQ687174.1 6 708
BX377861.2
U82108.1 7 1166 AAB53042.1
Z50150.1 7 1201 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CASKIN1 LOC105371045 TMEM204 LMF1 LOC105371038 CCNF WDR24 PKD1 LOC100287175 NUBP2 SSTR5 SNRNP25 CEMP1 PDIA2 ZNF598 FAM234A PGP FAHD1 LOC105371049 WFIKKN1 MAPK8IP3 FLJ42627 RHBDF1 WASIR2 METRN MEIOB TPSAB1 NTN3 SNHG9 RGS11 SNORA10 MIR3677 MIR6767 HN1L TPSB2 NARFL MIR6859-4 SNORA78 TBL3 LINC00254 AMDHD2 PRR35 HBZ CCDC78 UNKL IFT140 PIGQ E4F1 SYNGR3 RHBDL1 MSRB1 ABCA17P C16orf59 HAGH LOC100134368 RNF151 ECI1 POLR3K RPS2 MIR3176 C1QTNF8 DDX11L10 EME2 SNORA64 LOC652276 RAB40C GFER AXIN1 HBM MIR6511B1 SPSB3 LOC106660606 HAGHL ABCA3 BRICD5 TPSG1 MIR4717 LOC729652 STUB1 HBQ1 LOC105371184 DECR2 MIR3178 SOX8 GNPTG MIR6768 MRPS34 NHLRC4 RPL23AP5 TSR3 CACNA1H RPL3L NME4 JMJD8 BAIAP3 MRPL28 GNG13 MCRIP2 NTHL1 NDUFB10 LOC107984876 MIR662 LOC107987233 RAB11FIP3 LMF1-AS1 SNORD60 LOC105371047 RPUSD1 ATP6V0C SSTR5-AS1 PDPK1 NPRL3 NPW LUC7L PRSS29P DNASE1L2 UBE2I TMEM8A RAB26 IGFALS SNHG19 METTL26 CCDC154 MPG CRAMP1 MIR4516 MIR3177 CHTF18 PRSS27 MIR3180-5 CLCN7 MLST8 NOXO1 MSLN KCTD5 ARHGDIG FBXL16 PRR25 RHOT2 TELO2 LOC105371046 LOC101929280 WDR90 TPSD1 FAM173A RNPS1 NME3 HBA1 TBC1D24 MIR5587 SLC9A3R2 MIR1225 PTX4 TRAF7 ERVK13-1 TSC2 CAPN15 MIR940 LINC00235 C16orf91 HS3ST6 HBA2
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss MIR4717 CASKIN1 MIR3677 MIR4516 TBL3 MIR3180-5 MLST8 NOXO1 PKD1 E4F1 SYNGR3 RNPS1 NTHL1 ECI1 ZNF598 SLC9A3R2 PGP SNORD60 LOC105371049 MIR1225 TRAF7 NPW GFER DNASE1L2 RAB26 MIR6511B1 TSC2 LOC106660606 SNHG19 MIR940 ABCA3 BRICD5
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA10 NDUFB10 RNF151 ZNF598 SLC9A3R2 RPS2 SNORA78 TBL3 SNORA64 NOXO1 NPW GFER SYNGR3 SNHG9
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNORA10 NTHL1 NDUFB10 RNF151 MIR4516 ZNF598 SLC9A3R2 RPS2 SNORA78 LOC105371049 MIR1225 TBL3 SNORA64 NOXO1 NPW GFER PKD1 RPL3L MIR6511B1 TSC2 SYNGR3 SNHG9 MSRB1 HS3ST6
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA10 NTHL1 NDUFB10 RNF151 ZNF598 SLC9A3R2 RPS2 SNORA78 LOC105371049 MIR1225 TBL3 SNORA64 NOXO1 NPW GFER PKD1 MIR6511B1 TSC2 SYNGR3 SNHG9
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss NPW GFER RNF151 ZNF598 SLC9A3R2 SNORA78 SYNGR3 TBL3 SNHG9 NOXO1
dgv779e212 Chr.16:2037225 - 2038968 on Build GRCh38 Loss SLC9A3R2

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