Genomic Map
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Target Gene Details
Entrez Gene ID: | 11338 |
Gene Name: | U2 small nuclear RNA auxiliary factor 2 |
Gene Aliases: |
U2AF65 |
Location: |
Chr.19:55654050-55674716 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| U2AF2 | NM_001012478.1 | 5 | 1486 | NP_001012496.1 |
| NM_007279.2 | 5 | 1486 | NP_009210.1 | |
| XM_006722994.2 | 6 | 1524 | XP_006723057.1 | |
| XM_011526410.1 | 6 | 1524 | XP_011524712.1 | |
| AB451261.1 | 5 | 431 | ||
| AB451387.1 | 5 | 431 | ||
| BC008740.2 | 5 | 490 | AAH08740.1 | |
| BC030574.2 | 5 | 1390 | AAH30574.1 | |
| X64044.1 | 5 | 471 | CAA45409.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1061024 | Chr.19:55655735 - 55705993 on Build GRCh38 | Gain |
 U2AF2
EPN1
|
| nsv953625 | Chr.19:55637035 - 55699834 on Build GRCh38 | Deletion |
ZNF581
U2AF2
EPN1
ZNF580
CCDC106
LOC107983998
|
| nsv833882 | Chr.19:55647267 - 55815198 on Build GRCh38 | Loss |
RFPL4A
RFPL4AL1
NLRP9
U2AF2
EPN1
CCDC106
NLRP11
|
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Additional Information:
For this assay, SNP(s) [rs73936310,rs73936311] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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