Hs01779325_cn

• Gene Symbol: MIR6855
• Assay Reference Genome Location: Chr.9:129869666 on build GRCh38
• Cytoband: 9q34.11

Target Gene Details

• Entrez Gene ID: 102466750
• Gene Name: microRNA 6855
• Gene Aliases: hsa-mir-6855
• Location: Chr.9:129869605-129869671 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6855	NR_106914.1

Target Gene Details

• Entrez Gene ID: 10868
• Gene Name: ubiquitin specific peptidase 20
• Gene Aliases: LSFR3A, VDU2, hVDU2
• Location: Chr.9:129835417-129881838 on Build GRCh38
• Assay Gene Location: Overlaps Intron 14 - Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP20	NM_001008563.4			NP_001008563.2
	NM_001110303.3			NP_001103773.2
	NM_006676.7			NP_006667.3
	XM_005251665.3			XP_005251722.1
	XM_005251666.3			XP_005251723.1
	XM_011518161.2			XP_011516463.1
	XM_011518162.2			XP_011516464.1
	XM_017014221.1			XP_016869710.1
	AB023220.1
	AY074877.1			AAL79676.1
	BC039593.1			AAH39593.1
	BX462233.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1046477	Chr.9:129608081 - 129997996 on Build GRCh38	Gain	MIR6855 NTMT1 USP20 PTGES TOR1A C9orf50 TOR1B FNBP1 C9orf78 PRRX2-AS1 PRRX2 ASB6
nsv469902	Chr.9:129866750 - 129919340 on Build GRCh38	Loss	MIR6855 USP20 FNBP1
esv3621839	Chr.9:129701704 - 129885823 on Build GRCh38	Loss	MIR6855 USP20 PTGES TOR1A TOR1B C9orf78 PRRX2-AS1 PRRX2
nsv517374	Chr.9:129867142 - 129878447 on Build GRCh38	Loss	MIR6855 USP20
nsv8571	Chr.9:129863731 - 129875800 on Build GRCh38	Gain	MIR6855 USP20
nsv1161909	Chr.9:129834501 - 129870679 on Build GRCh38	Duplication	MIR6855 USP20 C9orf78

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
endocytosis
regulation of G-protein coupled receptor protein signaling pathway
protein deubiquitination
protein K63-linked deubiquitination
protein K48-linked deubiquitination

Function(s)

G-protein coupled receptor binding
cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity
protein binding
zinc ion binding