Hs01780486_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48034231 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 ELSPBP1 C19orf68 LIG1 CABP5 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SULT2B1 ELSPBP1 SNORD35A ALDH16A1 FUZ SNORD33 RASIP1 SYNGR4 VRK3 NUCB1 PNKP TULP2 RPL18 LIG1 LOC105447645 NTN5 SIGLEC16 SNAR-A11 CPT1C AKT1S1 SNAR-A7 FGF21 SNAR-C5 SNAR-A4 NUP62 NOSIP PLA2G4C LOC101059948 CARD8-AS1 SNAR-A13 BSPH1 ADM5 CARD8 SNAR-A14 RCN3 MIR4750 PPFIA3 CGB8 C19orf68 HSD17B14 SNAR-G2 SNAR-A12 DHDH SNAR-A5 SNAR-B2 SNAR-D SPACA4 IZUMO1 EMP3 NUCB1-AS1 KCNJ14 PTOV1 LOC105372430 GRWD1 PIH1D1 LOC101928295 SNAR-B1 SNORD32A MAMSTR PRRG2 MIR4751 SEC1P MIR4324 SNAR-A6 CA11 LOC100287477 PRMT1 FUT2 CGB7 FLT3LG SNAR-A2 CGB5 MED25 KCNA7 MIR6798 SLC6A16 TMEM143 FUT1 SIGLEC11 SCAF1 NTF4 SNAR-A9 KDELR1 C19orf73 PTH2 MIR150 DBP PTOV1-AS1 SLC17A7 DKKL1 MIR6800 AP2A1 IRF3 FTL MIR4749 CCDC155 SNAR-C4 RUVBL2 BAX GFY PRR12 SNAR-C3 BCL2L12 CGB3 SNAR-C1 TSKS CGB1 TBC1D17 PPP1R15A CCDC114 IL4I1 BCAT2 CABP5 CYTH2 FLJ26850 SNAR-A1 ZNF114 MIR5088 SNORD35B LHB FCGRT SNRNP70 FAM83E CGB2 LIN7B PLEKHA4 GYS1 PTOV1-AS2 SNAR-G1 PLA2G4C-AS1 TRPM4 SNAR-A10 TEAD2 RPL13A RPS11 HRC LMTK3 SNORD34 SNAR-A8 ZNF473 SNAR-C2 SPHK2 CD37 MIR6799 RRAS SNAR-A3 GRIN2D ATF5
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8 PLA2G4C-AS1 ELSPBP1 C19orf68 CCDC114 CABP5 SYNGR4 ZNF114 TMEM143 PLA2G4C EMP3 CARD8-AS1 LIG1 KDELR1 GRIN2D
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-C1 SNAR-A2 ELSPBP1 SNAR-C5 SNAR-A12 SULT2A1 CABP5 SNAR-A1 TPRX1 SNAR-C4 SNAR-C2 SNAR-A13 SNAR-C3 CRX LINC01595 SNAR-A3 BSPH1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C PLA2G4C-AS1 ELSPBP1 CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C1 SNAR-A2 PLA2G4C-AS1 ELSPBP1 SNAR-C5 SNAR-A12 SULT2A1 CABP5 SNAR-A1 TPRX1 PLA2G4C SNAR-C4 SNAR-C2 SNAR-A13 SNAR-C3 CRX LINC01595 SNAR-A3 BSPH1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding