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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49651472 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01782723_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 7 1207 NP_067051.2
XM_005259122.4 7 1490 XP_005259179.1
XM_011527194.2 7 1132 XP_011525496.1
XM_017027083.1 4 934 XP_016882572.1
AK024444.1 7 1207
BC011662.2 AAH11662.2
BC053992.1 6 1094 AAH53992.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss SCAF1 PRR12 NOSIP RRAS MIR5088 IRF3 PRMT1 BCL2L12 ADM5 PRRG2 CPT1C
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss SCAF1 PRR12 NOSIP RRAS MIR5088 IRF3 PRMT1 BCL2L12 ADM5 PRRG2 CPT1C
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss NUCB1 FCGRT DHDH BCL2L12 SIGLEC11 VRK3 CA11 PTOV1-AS2 CARD8-AS1 RASIP1 EMP3 CABP5 SNAR-G1 PPFIA3 RRAS TRPM4 IZUMO1 CYTH2 PIH1D1 FUT1 LOC105372430 MIR6798 PTOV1 GRIN2D SIGLEC16 MAMSTR CCDC155 ZNF114 SNORD35B SNORD35A BAX CD37 MIR4749 ZNF473 SNAR-C2 LOC100287477 SULT2B1 HRC SNAR-B2 CARD8 CGB5 KCNJ14 PNKP SNAR-C1 CPT1C MED25 LHB KCNA7 LIG1 MIR4324 MIR150 LIN7B PTOV1-AS1 SYNGR4 AP2A1 SNAR-D HSD17B14 SPHK2 SNAR-A3 FUZ NUP62 SLC17A7 SEC1P FAM83E MIR6800 PPP1R15A MIR4751 SNAR-C3 SNAR-A1 SLC6A16 C19orf68 AKT1S1 TULP2 NOSIP DBP LMTK3 LOC105447645 BSPH1 C19orf73 RPL18 CGB7 CCDC114 GYS1 SNAR-A8 SNAR-A13 SNAR-A12 SNORD33 PLA2G4C-AS1 FLJ26850 FLT3LG SNRNP70 GFY FUT2 GRWD1 PRR12 NTN5 PLA2G4C TSKS LOC101059948 SNAR-C4 SNAR-A9 FGF21 NUCB1-AS1 RPL13A IRF3 ALDH16A1 ADM5 SNAR-A10 RPS11 SNAR-A2 CGB3 SNAR-A5 MIR6799 PRMT1 LOC101928295 CGB1 CGB2 PLEKHA4 SNAR-G2 KDELR1 ELSPBP1 SNAR-A4 MIR5088 MIR4750 SNAR-A14 SNAR-A7 TMEM143 TBC1D17 BCAT2 TEAD2 DKKL1 PTH2 NTF4 SPACA4 IL4I1 SNAR-C5 RCN3 RUVBL2 SNAR-A11 SNAR-A6 SNORD34 ATF5 FTL SCAF1 SNORD32A SNAR-B1 CGB8 PRRG2
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain SCAF1 PRR12 RRAS MIR5088 IRF3 PRMT1 BCL2L12 ADM5 CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MED25 MIR5088 MIR4750 BCL2L12 PTOV1-AS1 TBC1D17 AP2A1 PTOV1-AS2 PRR12 RRAS FUZ NUP62 IL4I1 TSKS MIR6800 MIR4751 PTOV1 IRF3 ADM5 MIR4749 AKT1S1 ATF5 SCAF1 NOSIP MIR6799 PRMT1 PRRG2 PNKP CPT1C
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain SCAF1 PRR12 NOSIP RRAS MIR5088 IRF3 PRMT1 BCL2L12 ADM5 PRRG2 CPT1C
nsv579909 Chr.19:49649784 - 49659652 on Build GRCh38 Loss SCAF1 IRF3
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MED25 FCGRT MIR5088 BCL2L12 MIR150 PTOV1-AS1 SNORD33 AP2A1 PRR12 RRAS FUZ TSKS RCN3 MIR6800 SNORD35B RPL13A IRF3 SNORD35A ADM5 SNORD34 RPS11 SCAF1 NOSIP SNORD32A MIR6799 PRMT1 PRRG2 CPT1C
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss SCAF1 PRR12 NOSIP RRAS IRF3 PRMT1 BCL2L12 PRRG2
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss SCAF1 IRF3

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