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See other HM13 CNV Assays ›
Gene Symbol
HM13
Assay Reference Genome
Location

Chr.20:31538191 on build GRCh38
Cytoband
20q11.21
Assay ID Hs01787156_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81502

Gene Name:

 histocompatibility minor 13

Gene Aliases:

 H13, IMP1, IMPAS, IMPAS-1, MSTP086, PSENL3, PSL3, SPP, SPPL1

Location:

 Chr.20:31514410-31569567 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HM13 NM_030789.3 NP_110416.1
NM_178580.2 NP_848695.1
NM_178581.2 NP_848696.1
NM_178582.2 NP_848697.1
AF172086.1 AAQ13609.1
AF483215.1 AAM22076.1
AF515663.1 AAN77099.1
AJ345029.1 CAC87790.1
AJ420895.1 CAD13132.1
AK074686.1 BAC11138.1
AK075283.1 BAC11519.1
AK314410.1
AY169310.1 AAO12535.1
AY169311.1 AAO12536.1
AY169312.1 AAO12537.1
BC008938.2 AAH08938.1
BC008959.2 AAH08959.1
BC062595.1 AAH62595.1
BI192962.1
BI552780.1
DA087240.1
DQ168450.1
KU178790.1
KU178791.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv470546 Chr.20:31245806 - 31647499 on Build GRCh38 Gain COX4I2 ID1 DEFB117 LOC107985416 MIR3193 DEFB119 DEFB115 DEFB122 LINC00028 HM13-AS1 DEFB123 DEFB118 DEFB121 REM1 DEFB116 DEFB124 HM13
nsv1118664 Chr.20:31536497 - 31538997 on Build GRCh38 Duplication HM13
esv3645653 Chr.20:31535328 - 31555299 on Build GRCh38 Gain HM13
esv2763228 Chr.20:31247246 - 31651719 on Build GRCh38 Gain COX4I2 ID1 DEFB117 LOC107985416 MIR3193 DEFB119 DEFB115 DEFB122 LINC00028 HM13-AS1 DEFB123 DEFB118 DEFB121 REM1 DEFB116 DEFB124 HM13
dgv4300n100 Chr.20:31247234 - 32033468 on Build GRCh38 Gain ABALON DEFB117 MIR3193 DEFB119 PDRG1 BCL2L1 HM13-AS1 XKR7 TTLL9 DEFB124 HM13 TPX2 CCM2L COX4I2 ID1 LOC107985416 FOXS1 DEFB115 DEFB122 LINC00028 DEFB123 DUSP15 DEFB118 DEFB121 MYLK2 REM1 DEFB116
esv3645652 Chr.20:31500710 - 31576564 on Build GRCh38 Gain HM13-AS1 LOC107985416 HM13
nsv458961 Chr.20:31305698 - 31688103 on Build GRCh38 Gain COX4I2 ID1 DEFB117 LOC107985416 MIR3193 DEFB119 DEFB122 LINC00028 BCL2L1 HM13-AS1 DEFB123 DEFB118 DEFB121 REM1 DEFB116 DEFB124 HM13

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