Hs01789191_cn

• Gene Symbol: TUBGCP2
• Assay Reference Genome Location: Chr.10:133285536 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 10844
• Gene Name: tubulin gamma complex associated protein 2
• Gene Aliases: GCP-2, GCP2, Grip103, SPBC97, Spc97p, h103p, hGCP2, hSpc97
• Location: Chr.10:133278630-133312337 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TUBGCP2	NM_001256617.1	13	2272	NP_001243546.1
	NM_001256618.1	11	1999	NP_001243547.1
	NM_006659.3	12	2188	NP_006650.1
	NR_046330.1	12	2572
	XM_017015595.1	5	657	XP_016871084.1
	XM_017015596.1	5	657	XP_016871085.1
	AF042379.1	12	1878	AAC39728.1
	AK092113.1	12	2572
	AK096087.1	4	1666
	AK128430.1	1	2331
	AK223586.1	12	2079	BAD97306.1
	AK297251.1	11	1721
	AK299564.1	12	1742
	AK314520.1
	BC093770.1	11	1867	AAH93770.1
	BC111957.1	11	1867	AAI11958.1
	BC143247.1	12	1951

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470980	Chr.10:133186655 - 133409514 on Build GRCh38	Loss	KNDC1 PRAP1 ZNF511 MTG1 VENTX TUBGCP2 ADAM8 UTF1 ECHS1 CALY MIR202 MIR202HG PAOX MIR3944 FUOM
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	CYP2E1 KNDC1 PRAP1 ADGRA1-AS1 ZNF511 MTG1 SPRNP1 VENTX TUBGCP2 SCART1 ADAM8 UTF1 SYCE1 ECHS1 ADGRA1 CALY MIR202 MIR202HG PAOX SPRN MIR3944 FUOM
nsv509381	Chr.10:133246532 - 133290994 on Build GRCh38	Insertion	MIR202 MIR202HG TUBGCP2 ADAM8
nsv428243	Chr.10:133245214 - 133767422 on Build GRCh38	Gain	CYP2E1 PRAP1 ZNF511 MTG1 FRG2B SPRNP1 TUBGCP2 SCART1 ADAM8 SYCE1 ECHS1 CALY MIR202 MIR202HG PAOX SPRN MIR3944 FUOM
nsv1159786	Chr.10:133242961 - 133339792 on Build GRCh38	Deletion	ZNF511 CALY MIR202 MIR202HG TUBGCP2 ADAM8
esv3891901	Chr.10:133272876 - 133336528 on Build GRCh38	Loss	ZNF511 CALY TUBGCP2 ADAM8
nsv952705	Chr.10:133211797 - 133290296 on Build GRCh38	Deletion	KNDC1 MIR202 MIR202HG VENTX TUBGCP2 ADAM8 UTF1
nsv832038	Chr.10:133143596 - 133320747 on Build GRCh38	Gain+Loss	KNDC1 ZNF511 MIR202 MIR202HG VENTX TUBGCP2 ADAM8 UTF1
dgv2e196	Chr.10:133189913 - 133450541 on Build GRCh38	Duplication	KNDC1 PRAP1 ZNF511 MTG1 VENTX TUBGCP2 ADAM8 UTF1 ECHS1 CALY MIR202 MIR202HG PAOX SPRN MIR3944 FUOM
nsv1040726	Chr.10:133282503 - 133353665 on Build GRCh38	Loss	PRAP1 ZNF511 CALY FUOM TUBGCP2
nsv1037772	Chr.10:133263092 - 133403671 on Build GRCh38	Gain	PRAP1 ECHS1 ZNF511 MTG1 CALY PAOX MIR3944 FUOM TUBGCP2 ADAM8
nsv552587	Chr.10:133255089 - 133303529 on Build GRCh38	Loss	TUBGCP2 ADAM8
nsv1159785	Chr.10:133203815 - 133305981 on Build GRCh38	Deletion	KNDC1 MIR202 MIR202HG VENTX TUBGCP2 ADAM8 UTF1
esv3625030	Chr.10:133200862 - 133379742 on Build GRCh38	Gain	KNDC1 PRAP1 ZNF511 VENTX TUBGCP2 ADAM8 UTF1 ECHS1 CALY MIR202 MIR202HG PAOX MIR3944 FUOM
esv2760107	Chr.10:133121116 - 133286029 on Build GRCh38	Gain	KNDC1 ADGRA1 MIR202 MIR202HG VENTX TUBGCP2 ADAM8 UTF1
esv2750853	Chr.10:133266358 - 133621047 on Build GRCh38	Gain	CYP2E1 PRAP1 ZNF511 MTG1 SPRNP1 TUBGCP2 SCART1 ADAM8 SYCE1 ECHS1 CALY PAOX SPRN MIR3944 FUOM
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	PRAP1 ADGRA1-AS1 ZNF511 LINC01167 MTG1 LINC01166 SPRNP1 VENTX TUBGCP2 SCART1 LINC01168 ECHS1 MIR202HG SPRN CYP2E1 KNDC1 CFAP46 ADAM8 UTF1 SYCE1 ADGRA1 CALY MIR202 PAOX MIR3944 FUOM
dgv3e196	Chr.10:133266297 - 133450541 on Build GRCh38	Duplication	PRAP1 ECHS1 ZNF511 MTG1 CALY PAOX SPRN MIR3944 FUOM TUBGCP2 ADAM8
nsv832036	Chr.10:133089509 - 133368232 on Build GRCh38	Loss	KNDC1 PRAP1 ZNF511 VENTX TUBGCP2 ADAM8 UTF1 ECHS1 ADGRA1 CALY MIR202 MIR202HG FUOM
dgv1475n54	Chr.10:133257500 - 133333210 on Build GRCh38	Loss	ZNF511 CALY TUBGCP2 ADAM8

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor microtubule binding protein

Gene Ontology Categories:

Process(es)

protein complex assembly
microtubule nucleation
meiotic nuclear division
cytoplasmic microtubule organization
centrosome duplication
interphase microtubule nucleation by interphase microtubule organizing center
mitotic spindle assembly

Function(s)

structural constituent of cytoskeleton
protein binding
gamma-tubulin binding
microtubule minus-end binding