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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:289444 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01801813_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
BX648449.1
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LUC7L TELO2 AMDHD2 RPL23AP5 LOC652276 MSLN ARHGDIG HAGH MSRB1 MIR1225 LINC00254 PRSS29P NOXO1 MEIOB TBC1D24 MIR5587 NHLRC4 SNHG19 DECR2 C16orf59 LOC105371045 NPW MIR4717 LOC105371038 HBA1 MIR6859-4 RNPS1 SSTR5 LMF1-AS1 TPSAB1 SOX8 WFIKKN1 LOC105371049 PGP LOC105371046 GNPTG CACNA1H CCDC154 DDX11L10 ATP6V0C PDPK1 LOC107984876 FAHD1 MIR6768 RAB26 METRN E4F1 SPSB3 SNORA78 NDUFB10 CRAMP1 UBE2I NME4 RAB40C CAPN15 TPSG1 CEMP1 TBL3 MIR662 ABCA3 TSC2 AXIN1 MIR3180-5 NME3 TRAF7 MCRIP2 HAGHL MRPS34 MIR3178 CCNF IFT140 HBM C16orf91 TSR3 BRICD5 MIR940 SSTR5-AS1 TPSB2 RHBDF1 ABCA17P FBXL16 MIR3677 RPL3L MRPL28 METTL26 RPUSD1 LMF1 LOC101929280 HS3ST6 CASKIN1 PRSS27 WASIR2 SLC9A3R2 MIR6767 NTN3 RAB11FIP3 SNORA10 PDIA2 RHBDL1 PKD1 FAM173A HBQ1 GNG13 FLJ42627 LOC100287175 LOC105371047 MLST8 ZNF598 PTX4 RNF151 TMEM204 CHTF18 LOC100134368 HBZ TMEM8A NARFL MAPK8IP3 UNKL POLR3K LINC00235 DNASE1L2 SNRNP25 KCTD5 SNORD60 EME2 HBA2 SYNGR3 LOC106660606 FAM234A MIR3176 WDR24 GFER LOC107987233 SNHG9 BAIAP3 C1QTNF8 TPSD1 LOC105371184 NUBP2 LOC729652 JMJD8 MIR6511B1 PRR25 WDR90 RPS2 HN1L CLCN7 IGFALS ECI1 RHOT2 MPG ERVK13-1 SNORA64 STUB1 RGS11 PRR35 CCDC78 MIR4516 NPRL3 PIGQ NTHL1 MIR3177
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain MRPL28 RGS11 LOC100134368 NME4 RAB11FIP3 DECR2 RPL23AP5 TMEM8A ARHGDIG AXIN1 PDIA2 FAM234A
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 ARHGDIG AXIN1 PDIA2
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG AXIN1 PDIA2
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain RGS11 ARHGDIG AXIN1 PDIA2 FAM234A
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 ARHGDIG AXIN1 PDIA2
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss MRPL28 RGS11 LOC100134368 NME4 RAB11FIP3 DECR2 RPL23AP5 TMEM8A ARHGDIG AXIN1 PDIA2 FAM234A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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