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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114481 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01801990_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 2 255 NP_001308721.1
NM_013342.3 2 649 NP_037474.1
XM_005278261.1 1 121 XP_005278318.1
AF052052.1 3 522 AAD45182.1
AK310627.1 2 631
AK310647.1 2 620
BC004281.1 2 281 AAH04281.1
BC007776.2 2 267 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 TFPT NDUFA3 PRPF31 TARM1 OSCAR
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TFPT CNOT3 NDUFA3 PRPF31 TMC4 LENG1 MBOAT7
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TFPT CNOT3 NDUFA3 PRPF31 TSEN34 TMC4 LENG1 OSCAR MBOAT7
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion BIRC8 ZNF765 MIR935 MIR518A1 MIR518C MIR520B ZNF665 MIR498 MIR519A1 ZNF845 CACNG8 MIR518D MIR519D MIR517B LOC105372457 MIR371B MIR515-2 MIR519E MIR525 TSEN34 FAM90A27P MIR517C MIR520G LILRB5 MIR520E TFPT CNOT3 RPS9 ZNF525 CACNG6 MIR518B TMC4 VN1R2 MIR515-1 TPM3P9 MIR520D MIR520C LILRA6 MIR516B2 MIR372 MIR1283-1 MIR518E MIR527 ZNF331 MIR518A2 MIR519A2 MIR526A2 MIR518F MIR520F NLRP12 MIR371A MIR516A2 MIR1283-2 MIR520H ZNF818P MIR512-1 MIR526B NDUFA3 LILRB2 PRKCG ZNF761 VN1R4 MIR519C LILRA5 ZNF677 MIR4752 MIR521-2 DPRX LENG1 MIR373 MIR516A1 LILRB3 MIR517A MIR524 MIR526A1 MIR512-2 MIR523 TARM1 MIR522 OSCAR MBOAT7 VSTM1 CACNG7 ZNF813 MIR519B PRPF31 MIR516B1 MIR521-1 MIR1323 MIR520A MYADM LOC284379
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TFPT NDUFA3 PRPF31 TARM1 OSCAR
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss VSTM1 TFPT MIR935 NDUFA3 PRPF31 CACNG6 CACNG8 TARM1 OSCAR

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