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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114481 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01801990_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 2 255 NP_001308721.1
NM_013342.3 2 649 NP_037474.1
XM_005278261.1 1 121 XP_005278318.1
AF052052.1 3 522 AAD45182.1
AK310627.1 2 631
AK310647.1 2 620
BC004281.1 2 281 AAH04281.1
BC007776.2 2 267 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion NDUFA3 OSCAR VSTM1 TARM1 PRPF31 TFPT
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss CNOT3 NDUFA3 PRPF31 TMC4 TFPT MBOAT7 LENG1
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion CNOT3 NDUFA3 OSCAR TSEN34 PRPF31 TMC4 TFPT MBOAT7 LENG1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR520A MYADM VSTM1 MIR519B MIR512-1 LOC105372457 MIR372 CACNG6 VN1R2 ZNF677 ZNF813 MIR519A2 CNOT3 MIR520B MIR520E MIR516B1 CACNG7 MIR526A2 RPS9 MIR519C MIR526A1 MIR371B MIR516A1 MIR519E ZNF818P LOC284379 MBOAT7 ZNF525 MIR521-2 MIR518C MIR518E LILRB5 TSEN34 ZNF665 MIR1283-2 MIR518A2 MIR520D PRKCG MIR517B MIR935 NDUFA3 LILRB2 CACNG8 MIR519D MIR516B2 PRPF31 TMC4 TFPT LENG1 ZNF761 FAM90A27P MIR4752 LILRA6 LILRA5 MIR518A1 MIR371A BIRC8 MIR515-1 MIR520G MIR512-2 MIR520F MIR525 MIR517A MIR522 OSCAR MIR1323 VN1R4 MIR516A2 MIR519A1 LILRB3 MIR518D TPM3P9 MIR515-2 MIR526B MIR527 DPRX MIR523 MIR498 TARM1 MIR520C MIR1283-1 MIR518F ZNF331 NLRP12 MIR520H MIR521-1 ZNF765 MIR517C MIR524 MIR373 ZNF845 MIR518B
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss NDUFA3 OSCAR TARM1 PRPF31 TFPT
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss MIR935 NDUFA3 CACNG8 OSCAR VSTM1 TARM1 PRPF31 TFPT CACNG6

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