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See other STK19 CNV Assays ›
Gene Symbol
STK19
Assay Reference Genome
Location

Chr.6:31978930 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01817428_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8859

Gene Name:

 serine/threonine kinase 19

Gene Aliases:

 D6S60, D6S60E, G11, HLA-RP1, RP1

Location:

 Chr.6:31971175-31981446 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STK19 NM_004197.1 NP_004188.1
NM_032454.1 NP_115830.1
NR_026717.1
AK302111.1
AK307198.1
BC110347.1 AAI10348.1
BC121128.1
BC121129.1
BC143833.1
L26260.1 AAA20122.1
X77386.1 CAA54565.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601970 Chr.6:31970674 - 31980252 on Build GRCh38 Loss DXO STK19
nsv601971 Chr.6:31971488 - 32046679 on Build GRCh38 Gain TNXA DXO STK19 CYP21A1P CYP21A2 TNXB C4B C4A
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DQB1 PPT2 BTNL2 HLA-DRA C4A EHMT2 SLC44A4 SNORD48 MIR6833 HSPA1A HLA-DRB1 ATF6B STK19 CYP21A2 SKIV2L C4B HLA-DQB1-AS1 HCG23 ZBTB12 SNORD52 PBX2 PPT2-EGFL8 HLA-DQA1 FKBPL LOC101929163 EGFL8 TNXA NEU1 C6orf48 NOTCH4 AGPAT1 CFB RNF5 MIR6721 AGER HSPA1B DXO LOC100507547 HLA-DRB6 TNXB NELFE C2-AS1 HLA-DRB5 GPSM3 CYP21A1P C2 PRRT1 C6orf10 MIR1236
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss AGPAT1 PPT2 CFB C4A RNF5 MIR6721 AGER MIR6833 DXO ATF6B LOC100507547 STK19 CYP21A2 TNXB SKIV2L C4B NELFE C2-AS1 PBX2 PPT2-EGFL8 GPSM3 FKBPL CYP21A1P C2 PRRT1 EGFL8 TNXA MIR1236 NOTCH4
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6D MIR4646 PPT2 BTNL2 PRRC2A LOC102725068 SNORD117 TNF HLA-DRA C4A C6orf25 EHMT2 DDAH2 SLC44A4 SNORD48 MIR6833 HSPA1A BAG6 HLA-DRB1 ATF6B LY6G6E LY6G6F STK19 CYP21A2 MIR6832 AIF1 MCCD1 SKIV2L C4B APOM SAPCD1 LOC100287329 HCG23 LSM2 ZBTB12 DDX39B-AS1 SNORD52 PBX2 PPT2-EGFL8 FKBPL LOC101929163 DDX39B SAPCD1-AS1 NFKBIL1 HCG26 EGFL8 ATP6V1G2-DDX39B LY6G5C TNXA NEU1 MSH5 C6orf48 GPANK1 ATP6V1G2 NOTCH4 AGPAT1 LY6G6C NCR3 HSPA1L CFB RNF5 HCP5 MIR6721 C6orf47 AGER HSPA1B DXO LOC100507547 HLA-DRB6 TNXB NELFE LST1 C2-AS1 HLA-DRB5 CSNK2B ABHD16A GPSM3 CYP21A1P SNORD84 C2 VWA7 SNORA38 PRRT1 LTB CLIC1 VARS C6orf10 MICB LTA MSH5-SAPCD1 MIR1236 LY6G5B
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DQB1 PSMB8 BTNL2 PRRC2A TNF HLA-DOA HLA-DQB2 EHMT2 HLA-DRB1 ATF6B STK19 MIR6832 AIF1 APOM LOC100287329 HCG23 PBX2 HCG24 FKBPL DDX39B SAPCD1-AS1 HCG26 HLA-DQA2 ATP6V1G2-DDX39B KIFC1 PSMB9 GPANK1 ATP6V1G2 NOTCH4 PSMB8-AS1 AGPAT1 HSPA1L LOC100294145 RNF5 HCP5 C6orf47 AGER RING1 BRD2 HSPA1B COL11A2 TNXB C2-AS1 HLA-DPB1 HLA-DRB5 CSNK2B HCG25 ABHD16A CYP21A1P VWA7 PPP1R2P1 SNORA38 LTB SYNGAP1 RGL2 C6orf10 MSH5-SAPCD1 LY6G5B LY6G6D MIR4646 CUTA PPT2 HLA-DPA1 LOC102725068 SNORD117 DAXX MIR219A1 HLA-DRA C4A C6orf25 DDAH2 SLC44A4 SNORD48 MIR6833 HSPA1A BAG6 LY6G6E LY6G6F CYP21A2 MCCD1 SKIV2L C4B HLA-DQB1-AS1 SAPCD1 LSM2 ZBTB12 DDX39B-AS1 SNORD52 PPT2-EGFL8 HLA-DQA1 HLA-DPB2 LOC101929163 VPS52 ZBTB22 NFKBIL1 PFDN6 EGFL8 LY6G5C TNXA HSD17B8 NEU1 HLA-DOB MSH5 C6orf48 TAPBP RXRB LY6G6C ZBTB9 NCR3 TAP1 CFB MIR3135B MIR6721 DXO LOC100507547 HLA-DRB6 MIR6834 NELFE LST1 HLA-DMA HLA-DMB B3GALT4 SLC39A7 TAP2 GPSM3 SNORD84 C2 PRRT1 CLIC1 RPS18 VARS MICB MIR6873 PHF1 LTA MIR1236 WDR46 MIR5004
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LY6G6D MIR4646 PRRC2A LOC102725068 SNORD117 TNF C4A C6orf25 EHMT2 DDAH2 SLC44A4 SNORD48 HSPA1A BAG6 LY6G6E LY6G6F STK19 CYP21A2 MIR6832 AIF1 MCCD1 SKIV2L C4B APOM SAPCD1 LOC100287329 LSM2 ZBTB12 DDX39B-AS1 SNORD52 DDX39B SAPCD1-AS1 NFKBIL1 HCG26 HLA-B ATP6V1G2-DDX39B LY6G5C TNXA NEU1 MSH5 C6orf48 GPANK1 ATP6V1G2 LY6G6C NCR3 HSPA1L CFB HCP5 C6orf47 HSPA1B DXO MIR6891 TNXB NELFE LST1 C2-AS1 MICA CSNK2B ABHD16A CYP21A1P SNORD84 C2 VWA7 SNORA38 LTB CLIC1 VARS MICB LTA MSH5-SAPCD1 MIR1236 LY6G5B
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss DXO STK19 CFB SKIV2L NELFE C2 C2-AS1 MIR1236
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DQB1 PSMB8 BTNL2 PRRC2A TNF HLA-DOA HLA-DQB2 EHMT2 HLA-DRB1 ATF6B STK19 MIR6832 AIF1 APOM LOC100287329 HCG23 PBX2 HCG24 FKBPL DDX39B SAPCD1-AS1 HCG26 HLA-DQA2 ATP6V1G2-DDX39B KIFC1 PSMB9 GPANK1 ATP6V1G2 NOTCH4 PSMB8-AS1 AGPAT1 HSPA1L LOC100294145 RNF5 HCP5 C6orf47 AGER RING1 BRD2 HSPA1B COL11A2 TNXB C2-AS1 HLA-DPB1 HLA-DRB5 CSNK2B HCG25 ABHD16A CYP21A1P VWA7 PPP1R2P1 SNORA38 LTB SYNGAP1 RGL2 C6orf10 MSH5-SAPCD1 LY6G5B LY6G6D MIR4646 CUTA PPT2 HLA-DPA1 LOC102725068 SNORD117 DAXX MIR219A1 HLA-DRA C4A C6orf25 DDAH2 SLC44A4 SNORD48 MIR6833 HSPA1A BAG6 LY6G6E LY6G6F CYP21A2 MCCD1 SKIV2L C4B HLA-DQB1-AS1 SAPCD1 LSM2 ZBTB12 DDX39B-AS1 SNORD52 PPT2-EGFL8 HLA-DQA1 HLA-DPB2 LOC101929163 VPS52 ZBTB22 NFKBIL1 PFDN6 EGFL8 LY6G5C TNXA HSD17B8 NEU1 HLA-DOB MSH5 C6orf48 TAPBP RXRB LY6G6C ZBTB9 NCR3 TAP1 CFB MIR3135B MIR6721 DXO LOC100507547 HLA-DRB6 MIR6834 NELFE LST1 HLA-DMA HLA-DMB B3GALT4 SLC39A7 TAP2 GPSM3 SNORD84 C2 PRRT1 CLIC1 RPS18 VARS MICB MIR6873 PHF1 LTA MIR1236 WDR46 MIR5004
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6D MIR4646 PPT2 BTNL2 PRRC2A LOC102725068 SNORD117 TNF HLA-DRA C4A C6orf25 EHMT2 DDAH2 SLC44A4 SNORD48 MIR6833 HSPA1A BAG6 ATF6B LY6G6E LY6G6F STK19 CYP21A2 MIR6832 AIF1 MCCD1 SKIV2L C4B APOM SAPCD1 LOC100287329 HCG23 LSM2 ZBTB12 DDX39B-AS1 SNORD52 PBX2 PPT2-EGFL8 FKBPL LOC101929163 DDX39B SAPCD1-AS1 NFKBIL1 HCG26 HLA-B EGFL8 ATP6V1G2-DDX39B LY6G5C TNXA NEU1 MSH5 C6orf48 GPANK1 ATP6V1G2 NOTCH4 AGPAT1 LY6G6C NCR3 HSPA1L CFB RNF5 HCP5 MIR6721 C6orf47 AGER HSPA1B DXO MIR6891 LOC100507547 TNXB NELFE LST1 C2-AS1 MICA CSNK2B ABHD16A GPSM3 CYP21A1P SNORD84 C2 VWA7 SNORA38 PRRT1 LTB CLIC1 VARS C6orf10 MICB LTA MSH5-SAPCD1 MIR1236 LY6G5B
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion TNXA DXO STK19 CYP21A1P CYP21A2 TNXB SKIV2L C4B C4A NELFE

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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