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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30640598 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01823424_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 NP_001177653.1
NM_001254952.2 NP_001241881.1
NM_001318762.1 NP_001305691.1
NM_001318763.1 NP_001305692.1
NM_024909.3 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 BAE45758.1
AK023220.1 BAB14472.1
AK225107.1
AK297661.1
AK298743.1
AL535697.3
AL833858.1 CAD38717.1
BC006105.1 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX442806.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion HLA-E TRIM10 OR14J1 LINC01015 MDC1-AS1 HLA-H PPP1R11 OR2J2 FLOT1 GNL1 PPP1R18 C6orf136 PPP1R10 MUC21 TRIM39-RPP21 MIR6891 ABCF1 SNORD32B C6orf15 HLA-J OR2H1 DHX16 RPP21 LOC105375014 GABBR1 HCG22 OR5V1 HLA-G PRR3 POU5F1 MIR877 LOC101929006 HCG27 ZFP57 HLA-B TRIM39 MAS1L NRM TUBB HCG18 LINC00243 GTF2H4 HCG17 VARS2 TRIM40 PSORS1C3 ZNRD1ASP MUC22 TRIM26 HLA-F CCHCR1 MOG HLA-A MICA PSORS1C2 DPCR1 HLA-K UBD MRPS18B LOC554223 PSORS1C1 OR12D2 ZNRD1 MIR4640 HCG4B HCG9 RNF39 TRIM31-AS1 TRIM15 HLA-C IFITM4P HCG8 TRIM31 DDR1 HCG4 OR12D3 TCF19 OR10C1 HCG20 IER3 ATAT1 MDC1 OR11A1 CDSN HLA-L SFTA2 HLA-F-AS1 OR2H2
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss DHX16 MDC1-AS1 FLOT1 PPP1R18 C6orf136 MRPS18B PPP1R10 NRM TUBB HCG20 IER3 ATAT1 MDC1 ABCF1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss LINC00243 GTF2H4 VARS2 PSORS1C3 HLA-E MUC22 MDC1-AS1 CCHCR1 FLOT1 GNL1 PPP1R18 PSORS1C2 DPCR1 C6orf136 MRPS18B PPP1R10 MUC21 PSORS1C1 ABCF1 C6orf15 DHX16 MIR4640 LOC105375014 HLA-C HCG22 PRR3 POU5F1 MIR877 HCG27 DDR1 TCF19 NRM TUBB HCG20 IER3 ATAT1 MDC1 CDSN SFTA2
nsv969376 Chr.6:30633650 - 30640631 on Build GRCh38 Duplication ATAT1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion HLA-E TRIM10 OR14J1 LINC01015 MDC1-AS1 HLA-H PPP1R11 OR2J2 OR2B3 FLOT1 GNL1 PPP1R18 C6orf136 PPP1R10 MUC21 TRIM39-RPP21 TRIM27 ABCF1 SNORD32B C6orf15 HLA-J OR2H1 DHX16 RPP21 LOC105375014 LINC01623 GABBR1 HCG22 OR5V1 HLA-G PRR3 POU5F1 LINC00533 MIR877 LOC101929006 HCG27 ZFP57 OR2J3 TRIM39 MAS1L NRM TUBB HCG18 LINC00243 GTF2H4 HCG17 VARS2 TRIM40 PSORS1C3 ZNRD1ASP MUC22 TRIM26 HLA-F CCHCR1 MOG ZNF311 HLA-A LINC01556 PSORS1C2 DPCR1 HLA-K UBD MRPS18B LOC554223 PSORS1C1 OR12D2 ZNRD1 LOC100129636 MIR4640 HCG4B HCG9 RNF39 TRIM31-AS1 TRIM15 IFITM4P HCG8 TRIM31 DDR1 HCG4 OR12D3 OR2W1 TCF19 OR10C1 HCG20 IER3 ATAT1 MDC1 OR11A1 CDSN HLA-L SFTA2 HLA-F-AS1 HCG14 OR2H2 HCG16
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion HLA-E TRIM10 MDC1-AS1 HLA-H PPP1R11 FLOT1 GNL1 PPP1R18 C6orf136 PPP1R10 MUC21 TRIM39-RPP21 ABCF1 C6orf15 HLA-J DHX16 RPP21 LOC105375014 HCG22 HLA-G PRR3 POU5F1 MIR877 HCG27 TRIM39 NRM TUBB HCG18 LINC00243 GTF2H4 HCG17 VARS2 TRIM40 PSORS1C3 ZNRD1ASP MUC22 TRIM26 HLA-F CCHCR1 HLA-A PSORS1C2 DPCR1 HLA-K MRPS18B LOC554223 PSORS1C1 ZNRD1 MIR4640 HCG4B HCG9 RNF39 TRIM31-AS1 TRIM15 HLA-C IFITM4P HCG8 TRIM31 DDR1 HCG4 TCF19 HCG20 IER3 ATAT1 MDC1 CDSN HLA-L SFTA2 HLA-F-AS1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss HLA-E TRIM10 MDC1-AS1 HLA-H PPP1R11 FLOT1 GNL1 PPP1R18 C6orf136 PPP1R10 MUC21 TRIM39-RPP21 ABCF1 C6orf15 HLA-J DHX16 RPP21 LOC105375014 HCG22 PRR3 POU5F1 MIR877 HCG27 TRIM39 NRM TUBB HCG18 LINC00243 GTF2H4 HCG17 VARS2 TRIM40 PSORS1C3 ZNRD1ASP MUC22 TRIM26 CCHCR1 HLA-A PSORS1C2 DPCR1 HLA-K MRPS18B PSORS1C1 ZNRD1 MIR4640 HCG4B HCG9 RNF39 TRIM31-AS1 TRIM15 HLA-C HCG8 TRIM31 DDR1 TCF19 HCG20 IER3 ATAT1 MDC1 CDSN HLA-L SFTA2
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion LINC00243 GTF2H4 VARS2 PSORS1C3 HLA-E MUC22 MDC1-AS1 CCHCR1 FLOT1 GNL1 PPP1R18 PSORS1C2 DPCR1 C6orf136 MRPS18B PPP1R10 MUC21 PSORS1C1 ABCF1 C6orf15 DHX16 MIR4640 LOC105375014 HLA-C HCG22 PRR3 POU5F1 MIR877 HCG27 DDR1 TCF19 NRM TUBB HCG20 IER3 ATAT1 MDC1 CDSN SFTA2
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion LINC00243 GTF2H4 VARS2 MUC22 MDC1-AS1 FLOT1 GNL1 PPP1R18 DPCR1 C6orf136 MRPS18B PPP1R10 MUC21 ABCF1 DHX16 MIR4640 LOC105375014 HCG22 PRR3 MIR877 DDR1 NRM TUBB HCG20 IER3 ATAT1 MDC1 SFTA2
esv2677891 Chr.6:30636339 - 30642449 on Build GRCh38 Deletion ATAT1
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication HLA-E TRIM10 MDC1-AS1 PPP1R11 FLOT1 GNL1 PPP1R18 C6orf136 PPP1R10 MUC21 TRIM39-RPP21 MIR6891 ABCF1 C6orf15 HLA-J DHX16 RPP21 LOC105375014 HCG22 PRR3 POU5F1 MIR877 HCG27 HLA-B TRIM39 NRM HCP5 TUBB HCG18 LOC102725068 LINC00243 GTF2H4 HCG17 VARS2 TRIM40 PSORS1C3 ZNRD1ASP MUC22 TRIM26 CCHCR1 MICA PSORS1C2 DPCR1 MRPS18B PSORS1C1 ZNRD1 MIR4640 RNF39 TRIM31-AS1 HCG26 TRIM15 HLA-C HCG8 TRIM31 DDR1 TCF19 HCG20 IER3 ATAT1 MDC1 CDSN HLA-L SFTA2
esv3608513 Chr.6:30636336 - 30642406 on Build GRCh38 Loss ATAT1

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