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See other RGS11 CNV Assays ›
Gene Symbol
RGS11
Assay Reference Genome
Location

Chr.16:270798 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01886315_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8786

Gene Name:

 regulator of G-protein signaling 11

Gene Aliases:

 RS11

Location:

 Chr.16:268301-275943 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Intron 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RGS11 NM_001286485.1 NP_001273414.1
NM_001286486.1 NP_001273415.1
NM_003834.2 NP_003825.1
NM_183337.2 NP_899180.1
XM_011522719.2 XP_011521021.1
XM_011522720.2 XP_011521022.1
AB016929.1 BAA74751.1
AB209582.1 BAD92819.1
AF035153.1 AAC69175.1
AF035154.1 AAC69176.1
AK091701.1
AK293564.1
BC141803.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MPG C16orf59 LOC652276 CCDC154 SOX8 POLR3K MIR662 BRICD5 PRSS29P TSR3 LOC105371184 CAPN15 SNHG19 LOC100134368 MSRB1 RPL3L CCDC78 NDUFB10 RHOT2 PKD1 NPW WFIKKN1 MIR5587 MRPS34 MIR1225 RPS2 ARHGDIG NTN3 PIGQ CEMP1 RAB11FIP3 TPSG1 SNORD60 PTX4 ZNF598 LOC105371038 LOC106660606 CHTF18 SSTR5 TPSB2 NME3 NARFL LOC107987233 TELO2 C16orf91 MLST8 MIR6511B1 FAM173A PRR35 MAPK8IP3 LOC105371046 MIR6859-4 LINC00235 HBA2 EME2 NPRL3 IGFALS RPL23AP5 ERVK13-1 TMEM204 NTHL1 HAGHL MCRIP2 MIR3176 GNPTG LINC00254 MIR3180-5 DNASE1L2 TPSAB1 TPSD1 C1QTNF8 MIR940 MEIOB CCNF RAB26 TRAF7 CACNA1H TMEM8A ECI1 JMJD8 TBL3 AMDHD2 TBC1D24 SYNGR3 PRSS27 UNKL WASIR2 PRR25 SNORA78 GFER RNPS1 SNORA64 NHLRC4 CASKIN1 ABCA3 MIR3177 FAM234A HN1L PDPK1 SPSB3 LOC101929280 HAGH LUC7L ABCA17P UBE2I LOC100287175 CRAMP1 PDIA2 MIR6767 SNHG9 HBA1 RHBDF1 DECR2 MSLN FLJ42627 RPUSD1 SLC9A3R2 RHBDL1 ATP6V0C LOC105371049 HS3ST6 METTL26 METRN LMF1-AS1 HBQ1 RAB40C AXIN1 LOC105371045 NME4 MIR3677 RGS11 WDR24 HBM SNRNP25 MIR6768 MIR3178 NOXO1 MRPL28 PGP FAHD1 MIR4516 DDX11L10 MIR4717 HBZ GNG13 SSTR5-AS1 E4F1 LOC105371047 KCTD5 CLCN7 NUBP2 TSC2 LOC107984876 LOC729652 STUB1 LMF1 RNF151 FBXL16 SNORA10 WDR90 IFT140 BAIAP3
esv3570031 Chr.16:243389 - 278107 on Build GRCh38 Gain RGS11 FAM234A
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain PDIA2 RGS11 RPL23AP5 DECR2 TMEM8A LOC100134368 ARHGDIG AXIN1 MRPL28 NME4 RAB11FIP3 FAM234A
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain PDIA2 RGS11 ARHGDIG AXIN1 FAM234A
esv3637562 Chr.16:261769 - 271795 on Build GRCh38 Gain RGS11 FAM234A
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss PDIA2 RGS11 RPL23AP5 DECR2 TMEM8A LOC100134368 ARHGDIG AXIN1 MRPL28 NME4 RAB11FIP3 FAM234A

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More Information


Additional Information:

For this assay, SNP(s) [rs74988319] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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