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See other TAP2 CNV Assays ›
Gene Symbol
TAP2
Assay Reference Genome
Location

Chr.6:32829502 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01897139_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6891

Gene Name:

 transporter 2, ATP binding cassette subfamily B member

Gene Aliases:

 ABC18, ABCB3, APT2, D6S217E, PSF-2, PSF2, RING11

Location:

 Chr.6:32821833-32838823 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP2 NM_000544.3 NP_000535.3
NM_001290043.1 NP_001276972.1
NM_018833.2 NP_061313.2
AB073779.1 BAB71769.1
AB208953.1 BAD92190.1
AF078671.1 AAD31384.1
AF105151.1 AAD12059.1
AF176984.1 AAD50509.1
AK222823.1 BAD96543.1
AK223300.1 BAD97020.1
AK225657.1
AK225693.1
AK292963.1
BT009906.1 AAP88908.1
FM246456.1
L09191.1 AAA58648.1
L09271.1
L10287.1 AAA58649.1
M74447.1 AAA59841.1
M84748.1
U07844.1 AAA79901.1
Z22935.1 CAA80522.1
Z22936.1 CAA80523.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LOC100294145 VARS LY6G6D SNORD84 LOC100507547 CLIC1 APOM SNORD52 TAP2 HCP5 PPT2 HLA-DRB1 SLC44A4 LTB DDX39B FKBPL GPSM3 RXRB EGFL8 HLA-DQA1 LY6G5B DAXX TNXA HLA-DQA2 B3GALT4 HLA-DPB2 LY6G6C MIR219A1 LST1 HLA-DOB CYP21A2 LY6G5C C4A HCG23 MIR6721 PHF1 LTA SKIV2L STK19 HCG25 EHMT2 MIR4646 C2-AS1 MCCD1 PPT2-EGFL8 C6orf48 NFKBIL1 NEU1 DXO SLC39A7 LY6G6F HLA-DPA1 MIR6832 LSM2 TNF NELFE SAPCD1-AS1 MICB HSPA1B BRD2 PRRC2A HSD17B8 HCG26 SNORD48 AIF1 RNF5 PPP1R2P1 CUTA HLA-DQB1-AS1 HLA-DOA HLA-DPB1 HLA-DQB2 MIR3135B CSNK2B ZBTB9 HLA-DMA PRRT1 SNORA38 CFB KIFC1 DDX39B-AS1 VWA7 AGER C6orf47 MIR6833 COL11A2 GPANK1 HLA-DRA NCR3 MIR5004 MIR1236 HCG24 LY6G6E ABHD16A RING1 NOTCH4 MIR6834 ZBTB12 LOC101929163 SNORD117 TAPBP C6orf25 WDR46 DDAH2 MIR6873 HSPA1L ATP6V1G2 PBX2 MSH5 SYNGAP1 BAG6 C6orf10 AGPAT1 HLA-DRB6 HSPA1A RPS18 C2 ATF6B LOC100287329 PSMB8 PFDN6 ATP6V1G2-DDX39B HLA-DMB RGL2 CYP21A1P MSH5-SAPCD1 VPS52 SAPCD1 HLA-DQB1 HLA-DRB5 TNXB ZBTB22 C4B TAP1 BTNL2 LOC102725068 PSMB9 PSMB8-AS1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LOC100294145 VARS LY6G6D SNORD84 LOC100507547 CLIC1 APOM SNORD52 TAP2 HCP5 PPT2 HLA-DRB1 SLC44A4 LTB DDX39B FKBPL GPSM3 RXRB EGFL8 HLA-DQA1 LY6G5B DAXX TNXA HLA-DQA2 B3GALT4 HLA-DPB2 LY6G6C MIR219A1 LST1 HLA-DOB CYP21A2 LY6G5C C4A HCG23 MIR6721 PHF1 LTA SKIV2L STK19 HCG25 EHMT2 MIR4646 C2-AS1 MCCD1 PPT2-EGFL8 C6orf48 NFKBIL1 NEU1 DXO SLC39A7 LY6G6F HLA-DPA1 MIR6832 LSM2 TNF NELFE SAPCD1-AS1 MICB HSPA1B BRD2 PRRC2A HSD17B8 HCG26 SNORD48 AIF1 RNF5 PPP1R2P1 CUTA HLA-DQB1-AS1 HLA-DOA HLA-DPB1 HLA-DQB2 MIR3135B CSNK2B ZBTB9 HLA-DMA PRRT1 SNORA38 CFB KIFC1 DDX39B-AS1 VWA7 AGER C6orf47 MIR6833 COL11A2 GPANK1 HLA-DRA NCR3 MIR5004 MIR1236 HCG24 LY6G6E ABHD16A RING1 NOTCH4 MIR6834 ZBTB12 LOC101929163 SNORD117 TAPBP C6orf25 WDR46 DDAH2 MIR6873 HSPA1L ATP6V1G2 PBX2 MSH5 SYNGAP1 BAG6 C6orf10 AGPAT1 HLA-DRB6 HSPA1A RPS18 C2 ATF6B LOC100287329 PSMB8 PFDN6 ATP6V1G2-DDX39B HLA-DMB RGL2 CYP21A1P MSH5-SAPCD1 VPS52 SAPCD1 HLA-DQB1 HLA-DRB5 TNXB ZBTB22 C4B TAP1 BTNL2 LOC102725068 PSMB9 PSMB8-AS1
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion LOC100294145 KIFC1 SYNGAP1 SLC39A7 RPS18 TAP2 HLA-DPA1 RXRB COL11A2 PSMB8 HLA-DQA1 PFDN6 DAXX MIR5004 HLA-DQA2 BRD2 B3GALT4 HLA-DMB HLA-DPB2 RGL2 HSD17B8 HCG24 MIR219A1 RING1 PPP1R2P1 HLA-DOB CUTA MIR6834 HLA-DQB1-AS1 VPS52 PHF1 HLA-DOA HLA-DPB1 HLA-DQB2 TAPBP HLA-DQB1 HCG25 WDR46 MIR3135B ZBTB9 MIR6873 ZBTB22 TAP1 HLA-DMA PSMB9 PSMB8-AS1
nsv522573 Chr.6:32828908 - 32830506 on Build GRCh38 Loss TAP2
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss HLA-DMB LOC100294145 PSMB8 PPP1R2P1 TAP1 HLA-DMA PSMB9 BRD2 TAP2 PSMB8-AS1

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