Hs01934075_cn

• Gene Symbol: GDE1
• Assay Reference Genome Location: Chr.16:19505006 on build GRCh38
• Cytoband: 16p12.3

Target Gene Details

• Entrez Gene ID: 51573
• Gene Name: glycerophosphodiester phosphodiesterase 1
• Gene Aliases: 363E6.2, MIR16
• Location: Chr.16:19501693-19522145 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GDE1	NM_001324066.1	5	900	NP_001310995.1
	NM_001324067.1	4	811	NP_001310996.1
	NM_016641.3	5	887	NP_057725.1
	NR_136689.1	5	936
	AF212862.1	5	843	AAF65234.1
	AF306698.1	5	796
	AK312912.1	5	857
	AY463154.1	5	723	AAR25624.1
	BC014981.1	5	778	AAH14981.1
	BC025273.1	5	838	AAH25273.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833163	Chr.16:19457512 - 19628716 on Build GRCh38	Gain	TMC5 CCP110 C16orf62 GDE1
nsv571582	Chr.16:19038056 - 19790801 on Build GRCh38	Gain	IQCK TMC5 ITPRIPL2 CCP110 TMC7 C16orf62 KNOP1 SYT17 LOC102723385 CLEC19A GDE1 COQ7
nsv436835	Chr.16:18930652 - 21500976 on Build GRCh38	Insertion	UMOD TMC5 ACSM3 NPIPB3 ITPRIPL2 CCP110 CRYM TMC7 THUMPD1 ACSM5 C16orf62 LYRM1 GPR139 ACSM2B ZP2 LOC81691 SNX29P1 ERI2 CRYM-AS1 SMG1P3 LOC100190986 ACSM1 GPRC5B TMEM159 PDILT SYT17 GP2 CLEC19A DCUN1D3 DNAH3 IQCK ACSM2A KNOP1 LOC102723385 ANKS4B GDE1 COQ7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

lipid metabolic process
glycerophospholipid catabolic process

Function(s)

glycerophosphodiester phosphodiesterase activity
metal ion binding
glycerophosphoinositol glycerophosphodiesterase activity