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See other PTBP1 CNV Assays ›
Gene Symbol
PTBP1
Assay Reference Genome
Location

Chr.19:805512 on build GRCh38
Cytoband
19p13.3
Assay ID Hs01941294_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5725

Gene Name:

 polypyrimidine tract binding protein 1

Gene Aliases:

 HNRNP-I, HNRNPI, HNRPI, PTB, PTB-1, PTB-T, PTB2, PTB3, PTB4, pPTB

Location:

 Chr.19:797392-812327 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTBP1 NM_002819.4 NP_002810.1
NM_031990.3 NP_114367.1
NM_031991.3 NP_114368.1
XM_005259597.2 XP_005259654.1
XM_005259598.2 XP_005259655.1
AB208910.1 8 1269 BAD92147.1
BC002397.2 AAH02397.1
BC004383.1 AAH04383.1
BC013694.1 AAH13694.1
BT006819.1 AAP35465.1
X60648.1 CAA43056.1
X62006.1 CAA43973.1
X65371.1 CAA46443.1
X65372.1 CAA46444.1
X66975.1 CAA47386.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv566n67 Chr.19:805448 - 814402 on Build GRCh38 Gain PTBP1 PLPPR3 MIR3187
esv3643372 Chr.19:794878 - 807625 on Build GRCh38 Gain PTBP1 MIR4745
dgv134n111 Chr.19:607984 - 967584 on Build GRCh38 Deletion HCN2 AZU1 RNU6-9 PLPPR3 MISP PRTN3 MIR4745 KISS1R FGF22 FSTL3 RNF126 PTBP1 R3HDM4 ARID3A POLRMT LOC101928450 PALM CFD ELANE MED16 MIR3187 PRSS57
nsv828353 Chr.19:775335 - 812296 on Build GRCh38 Loss PTBP1 LOC101928450 MIR4745
nsv578167 Chr.19:797079 - 850574 on Build GRCh38 Loss PTBP1 AZU1 PLPPR3 MIR3187 PRTN3 MIR4745
nsv828354 Chr.19:796933 - 815173 on Build GRCh38 Gain PTBP1 PLPPR3 MIR3187 MIR4745
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion GZMM HCN2 SHC2 RNU6-9 TPGS1 WDR18 PRTN3 THEG FGF22 FSTL3 RNF126 PTBP1 GRIN3B ARID3A POLRMT LOC105372235 CFD CNN2 GPX4 ABCA7 PRSS57 C2CD4C POLR2E RNU6-2 AZU1 ODF3L2 PLPPR3 MISP ARHGAP45 MIR4745 KISS1R BSG TMEM259 MADCAM1 R3HDM4 LOC101928450 PALM ELANE MED16 CDC34 MIR3187
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss GZMM HCN2 SHC2 RNU6-9 TPGS1 WDR18 PRTN3 FGF22 FSTL3 RNF126 PTBP1 GRIN3B ARID3A POLRMT LOC105372235 CFD PRSS57 C2CD4C AZU1 ODF3L2 PLPPR3 MISP MIR4745 KISS1R BSG MADCAM1 R3HDM4 LOC101928450 PALM ELANE MED16 CDC34 MIR3187

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