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See other KLHL17 CNV Assays ›
Gene Symbol
KLHL17
Assay Reference Genome
Location

Chr.1:965056 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01941455_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339451

Gene Name:

 kelch like family member 17

Gene Aliases:

 -

Location:

 Chr.1:960103-965719 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLHL17 NM_198317.2 12 1901 NP_938073.1
XM_006710600.3 12 2454 XP_006710663.1
AK127585.1 11 1548
AY423763.1 12 1901 AAR03710.1
BC105742.1 9 1404
CA432461.1 1 681

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain SAMD11 LOC284600 ISG15 AGRN LOC100288175 LOC107985728 PERM1 RNF223 KLHL17 LOC100130417 LOC105378948 HES4 NOC2L PLEKHN1 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC105378591 OR4F29 KLHL17 PUSL1 TMEM240 ATAD3C GNB1 DVL1 MIR6726 TNFRSF4 AGRN NADK CCNL2 RNF223 SLC35E2 LINC01342 LOC729737 LOC107984841 DDX11L1 TNFRSF18 PLEKHN1 MIB2 SKI CPSF3L LOC100133331 ATAD3B LOC148413 LOC100134822 MIR429 CDK11B MIR200A FAM132A LOC100129534 MMP23B TAS1R3 MIR6859-1 HES4 LOC105378947 TTLL10 NOC2L VWA1 LOC100288069 LOC100132287 SDF4 PERM1 OR4F5 MTND1P23 MRPL20 FAM41C LOC105378948 MXRA8 FAAP20 MMP23A LOC102724312 LOC284600 LINC00115 MTND2P28 ANKRD65 MIR200B MORN1 LOC100506504 LOC105378589 CFAP74 LINC01128 C1orf159 LOC105378949 LOC107985728 ATAD3A WASH7P SLC35E2B GABRD LOC100287934 CALML6 B3GALT6 MIR6808 LOC105378592 TMEM52 ACAP3 LOC100288175 TMEM88B CDK11A MIR6727 LOC102725121 UBE2J2 LOC107985729 PRKCZ OR4F16 SCNN1D MIR6859-2 SAMD11 ISG15 SSU72 AURKAIP1 FAM87B LOC101928626 FAM138A LOC100130417 FNDC10 CPTP MIR1302-2 TTLL10-AS1 MIR6723
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion SAMD11 LOC284600 ISG15 AGRN LOC100288175 LOC107985728 PERM1 RNF223 KLHL17 LOC100130417 LOC105378948 HES4 NOC2L PLEKHN1 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion SAMD11 LOC284600 LOC107985728 PERM1 NOC2L KLHL17 PLEKHN1 LOC100130417
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC284600 LOC100288175 MIR429 MIR200A KLHL17 MIR200B HES4 TTLL10 NOC2L TNFRSF4 C1orf159 SAMD11 ISG15 AGRN LOC107985728 SDF4 PERM1 RNF223 LINC01342 FAM41C LOC100130417 LOC105378948 TNFRSF18 TTLL10-AS1 PLEKHN1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC284600 LOC100288175 LINC00115 MTND2P28 KLHL17 OR4F16 HES4 LOC105378947 NOC2L LOC100288069 LINC01128 C1orf159 SAMD11 ISG15 AGRN LOC107985728 PERM1 MTND1P23 FAM87B RNF223 LOC101928626 FAM41C LOC100130417 LOC105378948 LOC107984841 LOC100287934 MIR6723 PLEKHN1 LOC100133331
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC284600 LINC00115 KLHL17 ANKRD65 MIR200B PUSL1 TMEM240 ATAD3C DVL1 MIR6726 TNFRSF4 LINC01128 C1orf159 AGRN LOC107985728 ATAD3A NADK CCNL2 RNF223 SLC35E2 LINC01342 SLC35E2B LOC100287934 TNFRSF18 B3GALT6 MIR6808 PLEKHN1 MIB2 CPSF3L ATAD3B ACAP3 LOC148413 LOC100288175 MIR429 CDK11B MIR200A TMEM88B CDK11A FAM132A MIR6727 UBE2J2 MMP23B LOC107985729 TAS1R3 HES4 SCNN1D TTLL10 NOC2L VWA1 LOC100288069 SAMD11 ISG15 SSU72 SDF4 AURKAIP1 PERM1 FAM87B MRPL20 FAM41C LOC100130417 LOC105378948 FNDC10 MXRA8 CPTP MMP23A TTLL10-AS1 LOC102724312
nsv482036 Chr.1:960587 - 965715 on Build GRCh38 Gain KLHL17
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC284600 LOC100288175 MIR429 LINC00115 MIR200A FAM132A KLHL17 MIR200B UBE2J2 HES4 TTLL10 NOC2L TNFRSF4 LINC01128 C1orf159 SAMD11 ISG15 AGRN LOC107985728 SDF4 PERM1 FAM87B RNF223 LINC01342 FAM41C LOC100130417 LOC105378948 TNFRSF18 TTLL10-AS1 B3GALT6 PLEKHN1
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain SAMD11 ISG15 AGRN LOC100288175 PERM1 RNF223 LINC01342 KLHL17 LOC105378948 HES4 NOC2L PLEKHN1 C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC284600 ACAP3 LOC148413 LOC100288175 MIR429 MIR200A TMEM88B FAM132A MIR6727 KLHL17 ANKRD65 MIR200B PUSL1 UBE2J2 TAS1R3 HES4 SCNN1D TTLL10 NOC2L DVL1 MIR6726 TNFRSF4 C1orf159 SAMD11 ISG15 AGRN LOC107985728 SDF4 AURKAIP1 PERM1 CCNL2 MRPL20 RNF223 LINC01342 LOC100130417 LOC105378948 MXRA8 CPTP TNFRSF18 TTLL10-AS1 B3GALT6 MIR6808 PLEKHN1 CPSF3L
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss SAMD11 LOC284600 ISG15 AGRN LOC107985728 HES4 PERM1 NOC2L KLHL17 PLEKHN1 LOC100130417
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion SAMD11 ISG15 AGRN LOC100288175 SDF4 MIR429 MIR200A PERM1 RNF223 LINC01342 KLHL17 MIR200B LOC105378948 HES4 TTLL10 TNFRSF18 NOC2L TTLL10-AS1 PLEKHN1 TNFRSF4 C1orf159
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain SAMD11 LOC284600 LOC107985728 HES4 PERM1 NOC2L FAM41C KLHL17 PLEKHN1 LOC100130417 LINC01128

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More Information


Additional Information:

For this assay, SNP(s) [rs115741058] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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