Hs01962220_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67879617 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Intron 14 - Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC053598.1			AAH53598.1
	BC064567.1			AAH64567.1
	L26339.1			AAA21833.1
	U17474.1			AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	ZDHHC1 HSD11B2 SLC12A4 EXOC3L1 TMEM208 EDC4 LRRC29 LOC107984813 FHOD1 FBXL8 NUTF2 SLC9A5 AGRP PSKH1 ATP6V0D1 KIAA0895L CENPT TSNAXIP1 CTCF ENKD1 TPPP3 NOL3 LOC100505942 NRN1L KCTD19 PARD6A HSF4 GFOD2 LOC105369155 DDX28 DPEP3 LOC100131303 FAM65A MIR328 LRRC36 RANBP10 LCAT ACD THAP11 CARMIL2 PSMB10 ELMO3 C16orf86 CTRL DPEP2 PLEKHG4 E2F4 TRADD DUS2
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NUTF2 PSKH1 NRN1L EDC4
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	ZDHHC1 HSD11B2 SLC12A4 EXOC3L1 TMEM208 EDC4 LRRC29 B3GNT9 LOC107984813 FHOD1 FBXL8 NUTF2 SLC9A5 AGRP PSKH1 ATP6V0D1 KIAA0895L CENPT TSNAXIP1 CTCF ENKD1 TPPP3 NOL3 LOC100505942 NRN1L KCTD19 PARD6A HSF4 GFOD2 LOC105369155 DDX28 DPEP3 LOC100131303 FAM65A MIR328 LRRC36 RANBP10 LCAT ACD THAP11 C16orf70 CARMIL2 PSMB10 ELMO3 C16orf86 CTRL DPEP2 PLEKHG4 E2F4 TRADD DUS2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding