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Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1296232 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02024503_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 AAH04874.2
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 SCNN1D ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MRPL20 TMEM52 LOC102725121 WASH7P LOC105378589 SLC35E2 SLC35E2B TAS1R3 LOC105378947 LOC102724312 LOC105378948 PERM1 FAM132A SSU72 TNFRSF18 MIR200A LOC148413 LINC00115 CCNL2 NADK CALML6 SCNN1D LOC100130417 LOC100288069 ATAD3C MXRA8 GABRD PUSL1 LOC100132287 CFAP74 MMP23B LOC100133331 VWA1 DVL1 CPTP MIR6859-2 AURKAIP1 LOC107984841 KLHL17 OR4F16 ATAD3B C1orf159 CDK11B MIR1302-2 CPSF3L OR4F29 MIR6726 TMEM88B GNB1 LINC01342 SKI OR4F5 MORN1 LOC100134822 DDX11L1 MIR6808 AGRN ISG15 MIR6723 TMEM240 LOC100287934 B3GALT6 TNFRSF4 NOC2L UBE2J2 LOC101928626 RNF223 HES4 MMP23A ATAD3A PLEKHN1 MIR429 LOC105378591 FAAP20 PRKCZ LOC107985728 LOC284600 MIR6727 CDK11A SAMD11 ACAP3 LOC100129534 ANKRD65 LOC729737 TTLL10 LINC01128 LOC105378949 LOC100288175 FAM87B MIB2 MIR200B FAM41C TTLL10-AS1 MTND1P23 SDF4 FNDC10 MTND2P28 LOC107985729 FAM138A MIR6859-1 LOC105378592 LOC100506504
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SDF4 UBE2J2 MIR6726 SCNN1D ACAP3 FAM132A B3GALT6
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP TAS1R3 MIR6726 MIR6808 PUSL1 ACAP3 CPSF3L MIR6727 DVL1
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 SCNN1D ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF4 TTLL10 UBE2J2 MIR6726 TNFRSF18 RNF223 MIR200A LINC01342 MIR200B TTLL10-AS1 SDF4 C1orf159 SCNN1D ACAP3 MIR429 FAM132A B3GALT6
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6726 LINC01342 PUSL1 MIR6727 TAS1R3 AGRN ACAP3 LOC105378948 FAM132A B3GALT6 TNFRSF4 CPTP TTLL10 UBE2J2 LOC100288175 TNFRSF18 RNF223 MIR200A MIR200B TTLL10-AS1 SDF4 C1orf159 SCNN1D MIR429 CPSF3L
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPTP AURKAIP1 TAS1R3 MIR6726 MIR6808 MXRA8 SCNN1D PUSL1 ACAP3 CPSF3L MIR6727 DVL1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MRPL20 MIR6726 TMEM88B LINC01342 SLC35E2 SLC35E2B TAS1R3 MIR6808 AGRN LOC102724312 ISG15 LOC105378948 TMEM240 PERM1 LOC100287934 FAM132A B3GALT6 TNFRSF4 SSU72 NOC2L UBE2J2 TNFRSF18 RNF223 MIR200A HES4 LOC148413 LINC00115 CCNL2 NADK MMP23A ATAD3A PLEKHN1 SCNN1D MIR429 LOC100130417 LOC100288069 ATAD3C LOC107985728 MXRA8 PUSL1 LOC284600 MMP23B MIR6727 CDK11A VWA1 SAMD11 ACAP3 DVL1 ANKRD65 CPTP AURKAIP1 TTLL10 LINC01128 LOC100288175 KLHL17 FAM87B MIB2 MIR200B FAM41C ATAD3B TTLL10-AS1 SDF4 FNDC10 C1orf159 CDK11B LOC107985729 CPSF3L
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MRPL20 MIR6726 ATAD3C TMEM88B MXRA8 LINC01342 PUSL1 MMP23B MIR6727 TAS1R3 MIR6808 VWA1 LOC102724312 ACAP3 TMEM240 FAM132A B3GALT6 DVL1 ANKRD65 TNFRSF4 CPTP SSU72 AURKAIP1 TTLL10 UBE2J2 TNFRSF18 MIR200A MIB2 MIR200B ATAD3B TTLL10-AS1 LOC148413 SDF4 FNDC10 C1orf159 CCNL2 ATAD3A CDK11B LOC107985729 SCNN1D MIR429 CPSF3L
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPTP TAS1R3 MIR6726 MIR6808 MXRA8 SCNN1D PUSL1 ACAP3 CPSF3L MIR6727 DVL1
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss CPTP AURKAIP1 UBE2J2 MIR6726 MXRA8 PUSL1 MIR6727 TAS1R3 MIR6808 SCNN1D ACAP3 CPSF3L DVL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MRPL20 MIR6726 TMEM88B LOC107985728 MXRA8 LINC01342 PUSL1 LOC284600 MIR6727 TAS1R3 MIR6808 AGRN SAMD11 ISG15 ACAP3 LOC105378948 PERM1 FAM132A B3GALT6 DVL1 ANKRD65 TNFRSF4 CPTP AURKAIP1 TTLL10 NOC2L UBE2J2 LOC100288175 TNFRSF18 RNF223 MIR200A HES4 KLHL17 MIR200B TTLL10-AS1 LOC148413 SDF4 C1orf159 CCNL2 PLEKHN1 SCNN1D MIR429 LOC100130417 CPSF3L
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF4 TTLL10 UBE2J2 MIR6726 TNFRSF18 MIR200A PUSL1 MIR200B TTLL10-AS1 MIR6727 SDF4 SCNN1D ACAP3 MIR429 FAM132A CPSF3L B3GALT6

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More Information


Additional Information:

For this assay, SNP(s) [rs139600717] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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