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See other TMC4 CNV Assays ›
Gene Symbol
TMC4
Assay Reference Genome
Location

Chr.19:54165552 on build GRCh38
Cytoband
19q13.42
Assay ID Hs02054162_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 147798

Gene Name:

 transmembrane channel like 4

Gene Aliases:

 -

Location:

 Chr.19:54160095-54173250 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMC4 NM_001145303.2 NP_001138775.2
NM_144686.3 NP_653287.2
XM_011526486.2 XP_011524788.1
AK314973.1
AY236492.1 AAP69870.1
AY263166.1 AAP78781.1
BC025323.1 AAH25323.1
BQ082417.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss MBOAT7 TFPT LENG1 PRPF31 TMC4 NDUFA3 CNOT3
nsv9751 Chr.19:54158885 - 54193528 on Build GRCh38 Gain MBOAT7 TSEN34 LENG1 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion MBOAT7 TFPT TSEN34 LENG1 PRPF31 OSCAR TMC4 NDUFA3 CNOT3
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion TARM1 MIR515-2 MIR521-2 MIR373 BIRC8 OSCAR ZNF761 NDUFA3 MIR526A1 MIR526A2 TSEN34 MIR516B1 MIR1323 MIR519D ZNF765 MYADM MIR520C MIR518C ZNF813 MIR524 MIR519C TMC4 LOC284379 VN1R4 MIR517A MIR520H MIR371B MIR518D MIR1283-2 CNOT3 TFPT MIR4752 CACNG6 MIR520E MIR520F MIR519B MIR522 ZNF845 MIR516B2 FAM90A27P MIR520B MIR519A2 MIR523 MIR517C ZNF665 LILRA5 MIR517B MIR518A1 ZNF525 LILRB2 MIR519E MBOAT7 MIR1283-1 MIR516A1 LENG1 MIR515-1 MIR371A MIR516A2 LILRB5 MIR935 RPS9 MIR526B LILRB3 NLRP12 MIR521-1 ZNF818P MIR520D CACNG8 MIR520A MIR512-2 ZNF331 MIR498 MIR518B PRKCG LILRA6 LOC105372457 MIR519A1 TPM3P9 MIR520G MIR527 ZNF677 VSTM1 MIR518E MIR518A2 PRPF31 VN1R2 MIR372 MIR525 MIR518F DPRX CACNG7 MIR512-1
nsv510774 Chr.19:54158011 - 54269511 on Build GRCh38 Deletion MBOAT7 TSEN34 LENG1 LILRB5 RPS9 LILRA6 LILRB3 TMC4
nsv428371 Chr.19:54163847 - 54366984 on Build GRCh38 Gain+Loss MBOAT7 TSEN34 MIR4752 LILRA4 LILRB5 LILRA5 RPS9 LILRB2 LILRA6 LILRB3 TMC4 LAIR1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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