Hs02055394_cn

• Gene Symbol: GCNT7
• Assay Reference Genome Location: Chr.20:56518770 on build GRCh38
• Cytoband: 20q13.31

Target Gene Details

• Entrez Gene ID: 140687
• Gene Name: glucosaminyl (N-acetyl) transferase family member 7
• Gene Aliases: C20orf105, dJ1153D9.2, gcnt
• Location: Chr.20:56491492-56525925 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GCNT7	NM_080615.1			NP_542182.1
	AK131203.1			BAD18395.1

Target Gene Details

• Entrez Gene ID: 51507
• Gene Name: replication termination factor 2 domain containing 1
• Gene Aliases: C20orf43, CDAO5, HSPC164, SHUJUN-3
• Location: Chr.20:56468585-56518886 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RTFDC1	NM_001283035.1	10	1629	NP_001269964.1
	NM_001283036.1	9	1536	NP_001269965.1
	NM_001283037.1	8	1484	NP_001269966.1
	NM_016407.4	9	1539	NP_057491.2
	XM_017027872.1	12	1732	XP_016883361.1
	AA814039.1	1	168
	AF117231.1	9	1487	AAF17212.1
	AF161513.1	9	1496	AAF29128.1
	AF161518.1	9	1465	AAF29133.1
	AF212244.1	9	1476	AAK14929.1
	AI352436.1
	AK000481.1	9	1469	BAA91193.1
	AK000586.1	8	1432
	AK026118.1
	BC003359.1	9	1466	AAH03359.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv525425	Chr.20:56403979 - 56897294 on Build GRCh38	Gain	CASS4 FAM209A GCNT7 RTFDC1 LOC105372682 FAM209B TFAP2C CSTF1
nsv834015	Chr.20:56518712 - 56656502 on Build GRCh38	Loss	FAM209A GCNT7 RTFDC1 LOC105372682 FAM209B TFAP2C
nsv1056574	Chr.20:56495687 - 56761211 on Build GRCh38	Gain	FAM209A GCNT7 RTFDC1 LOC105372682 FAM209B TFAP2C

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

protein glycosylation
biological_process
mitotic DNA replication termination

Function(s)

acetylglucosaminyltransferase activity
molecular_function