Hs02058279_cn

• Gene Symbol: MIR6789
• Assay Reference Genome Location: Chr.19:2235789 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 102466736
• Gene Name: microRNA 6789
• Gene Aliases: hsa-mir-6789
• Location: Chr.19:2235829-2235926 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6789	NR_106847.1

Target Gene Details

• Entrez Gene ID: 55111
• Gene Name: pleckstrin homology domain containing J1
• Gene Aliases: GNRPX
• Location: Chr.19:2229952-2236724 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PLEKHJ1	NM_001300836.1			NP_001287765.1
	NM_018049.2			NP_060519.1
	XM_017026924.1			XP_016882413.1
	XM_017026925.1			XP_016882414.1
	XM_017026926.1			XP_016882415.1
	XM_017026927.1			XP_016882416.1
	XM_017026928.1			XP_016882417.1
	AK001159.1			BAA91525.1
	AK092742.1	2	311
	AK097723.1
	AK098725.1
	BC003084.2			AAH03084.1
	BC008966.2			AAH08966.1
	CN365243.1
	CR457253.1			CAG33534.1
	HY085955.1
	HY101097.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2389	Chr.19:2206862 - 2240689 on Build GRCh38	Insertion	MIR1227 DOT1L PLEKHJ1 MIR6789 LOC105372239 SF3A2
nsv578382	Chr.19:2194897 - 2260362 on Build GRCh38	Loss	MIR1227 DOT1L PLEKHJ1 MIR4321 MIR6789 AMH LOC105372239 SF3A2 JSRP1
dgv6218n54	Chr.19:2221793 - 2336009 on Build GRCh38	Loss	DOT1L C19orf35 OAZ1 MIR4321 SPPL2B AMH SF3A2 LINGO3 JSRP1 MIR1227 PLEKHJ1 MIR6789 LOC105372239 LSM7
nsv953943	Chr.19:2169602 - 2236001 on Build GRCh38	Deletion	MIR1227 DOT1L PLEKHJ1 MIR6789 LOC105372239
nsv833706	Chr.19:2131211 - 2249764 on Build GRCh38	Loss	MIR1227 DOT1L PLEKHJ1 MIR6789 AMH LOC105372239 SF3A2 AP3D1
nsv578383	Chr.19:2214058 - 2285197 on Build GRCh38	Loss	MIR1227 DOT1L C19orf35 PLEKHJ1 OAZ1 MIR4321 MIR6789 AMH LOC105372239 SF3A2 JSRP1
nsv833707	Chr.19:2187092 - 2372223 on Build GRCh38	Loss	DOT1L C19orf35 OAZ1 MIR4321 SPPL2B AMH SF3A2 LINGO3 JSRP1 MIR1227 PLEKHJ1 MIR6789 LOC105372239 LSM7

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein