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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114600 on build GRCh38
Cytoband
19q13.42
Assay ID Hs02097101_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 2 136 NP_001308721.1
NM_013342.3 2 530 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 3 403 AAD45182.1
AK310627.1 2 512
AK310647.1 2 501
BC004281.1 2 162 AAH04281.1
BC007776.2 2 148 AAH07776.1
BI820344.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 TARM1 VSTM1 OSCAR TFPT NDUFA3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss PRPF31 CNOT3 TMC4 TFPT NDUFA3 MBOAT7 LENG1
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion PRPF31 OSCAR CNOT3 TSEN34 TMC4 TFPT NDUFA3 MBOAT7 LENG1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion LILRB5 LILRA5 MIR519A2 MIR516B2 OSCAR MIR519C MIR518C ZNF813 MIR522 TMC4 MIR516B1 NLRP12 MIR518A2 MIR519B LOC105372457 MIR526A1 CACNG8 MIR515-1 MIR526A2 MIR516A1 ZNF331 CNOT3 LILRA6 MIR373 MIR523 LILRB3 ZNF818P MIR524 MBOAT7 DPRX FAM90A27P MIR512-1 MIR525 MIR1283-1 CACNG7 ZNF845 MIR520F MIR520C MIR517B ZNF677 MIR521-1 MIR1283-2 RPS9 LILRB2 MIR518D BIRC8 MIR520E MIR515-2 MIR371B MIR935 MIR1323 LOC284379 MYADM MIR512-2 MIR520G VN1R2 MIR520A ZNF765 MIR526B MIR517C MIR498 MIR517A MIR516A2 LENG1 MIR518F MIR520D MIR519E MIR521-2 ZNF525 ZNF761 ZNF665 VN1R4 TFPT NDUFA3 MIR520B MIR519D MIR4752 PRPF31 TARM1 PRKCG VSTM1 MIR520H MIR519A1 MIR371A TPM3P9 CACNG6 TSEN34 MIR372 MIR518B MIR518E MIR527 MIR518A1
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss PRPF31 TARM1 OSCAR TFPT NDUFA3
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss PRPF31 TARM1 VSTM1 OSCAR CACNG8 CACNG6 TFPT MIR935 NDUFA3

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