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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114600 on build GRCh38
Cytoband
19q13.42
Assay ID Hs02097101_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 2 136 NP_001308721.1
NM_013342.3 2 530 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 3 403 AAD45182.1
AK310627.1 2 512
AK310647.1 2 501
BC004281.1 2 162 AAH04281.1
BC007776.2 2 148 AAH07776.1
BI820344.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion OSCAR VSTM1 NDUFA3 PRPF31 TFPT TARM1
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss LENG1 CNOT3 MBOAT7 NDUFA3 PRPF31 TMC4 TFPT
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion OSCAR LENG1 CNOT3 MBOAT7 NDUFA3 PRPF31 TMC4 TFPT TSEN34
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion CNOT3 FAM90A27P NLRP12 RPS9 MIR518E ZNF818P LILRA6 TMC4 VN1R2 MIR520C MIR520D ZNF845 MIR519C ZNF331 NDUFA3 MIR516B2 MIR521-2 MIR516A1 DPRX MIR520B MIR520G MIR527 MIR516A2 ZNF765 BIRC8 MIR520F ZNF525 MIR516B1 MIR519A1 MIR512-2 MIR519A2 MIR518D MIR520A MIR519D MIR517B MIR518F MIR935 MIR521-1 MIR523 MIR526A1 MIR520E MIR372 LOC284379 LOC105372457 OSCAR MIR518C MIR371A CACNG7 VN1R4 MIR526A2 TFPT TARM1 TSEN34 MIR1283-1 MIR1323 MIR498 LENG1 VSTM1 MBOAT7 CACNG8 ZNF665 PRPF31 MIR522 MIR520H MIR517A MYADM MIR515-2 MIR515-1 ZNF677 TPM3P9 PRKCG MIR518B CACNG6 MIR1283-2 MIR519E LILRB3 MIR517C MIR526B MIR524 MIR525 LILRB2 ZNF761 MIR371B MIR519B MIR373 LILRA5 MIR4752 LILRB5 MIR518A1 MIR518A2 MIR512-1 ZNF813
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss OSCAR NDUFA3 PRPF31 TFPT TARM1
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss MIR935 OSCAR VSTM1 CACNG8 CACNG6 NDUFA3 PRPF31 TFPT TARM1

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