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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:802247 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02127289_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 6 1271 NP_665893.2
NM_145887.3 6 1271 NP_665894.2
XM_005253005.4 7 2209 XP_005253062.1
XM_005253006.4 7 1772 XP_005253063.1
XM_005253007.3 6 1289 XP_005253064.1
XM_005253008.4 7 2269 XP_005253065.1
XM_011520209.2 6 1507 XP_011518511.1
XM_011520210.2 7 2209 XP_011518512.1
XM_011520211.2 7 2209 XP_011518513.1
XM_011520212.1 6 1349 XP_011518514.1
XM_011520213.2 4 491 XP_011518515.1
XM_017017993.1 3 703 XP_016873482.1
AB208832.1 4 2075 BAD92069.1
AB208949.1 4 2039 BAD92186.1
AB209529.1 4 2181 BAD92766.1
AF229178.1 5 1473 AAF69491.1
AF274972.1 6 1267 AAG13461.1
AF465246.1 3 651 AAP97716.1
AK074893.1 3 274 BAC11272.1
AL833849.1 3 507 CAD38708.1
BC014904.1 5 1209 AAH14904.1
BQ924290.1 3 544
BX349115.2 4 624

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PANO1 SLC25A22 CD151 CRACR2B TSPAN4 PNPLA2 CHID1 PIDD1 PDDC1 LOC171391 CEND1 POLR2L SNORA52 RPLP2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PANO1 PTDSS2 SLC25A22 LOC143666 DEAF1 CD151 CRACR2B CDHR5 PNPLA2 CHID1 MUC6 TALDO1 PKP3 LRRC56 EPS8L2 SIGIRR LOC101927503 CEND1 ANO9 RPLP2 MUC5AC TOLLIP B4GALNT4 MUC5B PHRF1 DRD4 RASSF7 TMEM80 TSPAN4 PIDD1 MUC2 LMNTD2 PDDC1 MIR210 SCT LOC101059906 LOC171391 IRF7 RNH1 AP2A2 HRAS MIR6744 POLR2L SNORA52 MIR210HG
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PANO1 SLC25A22 CD151 CRACR2B TSPAN4 PNPLA2 CHID1 PIDD1 PDDC1 LOC171391 AP2A2 CEND1 POLR2L SNORA52 RPLP2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PANO1 PTDSS2 SLC25A22 LOC143666 DEAF1 CD151 CRACR2B CDHR5 PNPLA2 CHID1 MUC6 TALDO1 LRRC56 EPS8L2 SIGIRR LOC101927503 CEND1 ANO9 RPLP2 MUC5AC TOLLIP MUC5B TOLLIP-AS1 PHRF1 DRD4 RASSF7 TMEM80 TSPAN4 PIDD1 MUC2 LMNTD2 PDDC1 MIR210 SCT LOC101059906 LOC171391 IRF7 RNH1 AP2A2 HRAS MIR6744 POLR2L SNORA52 MIR210HG
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PANO1 PTDSS2 SLC25A22 LOC143666 DEAF1 CD151 CRACR2B CDHR5 PNPLA2 CHID1 TALDO1 PKP3 LRRC56 EPS8L2 SIGIRR CEND1 ANO9 RPLP2 B4GALNT4 PHRF1 DRD4 RASSF7 TMEM80 TSPAN4 PIDD1 LMNTD2 PDDC1 MIR210 SCT LOC101059906 LOC171391 IRF7 RNH1 AP2A2 HRAS POLR2L SNORA52 MIR210HG
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss LOC171391 PANO1 SLC25A22 CEND1 RPLP2 PIDD1 TALDO1 PDDC1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PANO1 SLC25A22 CD151 CRACR2B TSPAN4 PNPLA2 CHID1 PIDD1 PDDC1 LOC171391 CEND1 POLR2L SNORA52 RPLP2
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain LOC171391 PANO1 SLC25A22 CD151 CRACR2B CEND1 SNORA52 PNPLA2 RPLP2 PIDD1 PDDC1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PANO1 PTDSS2 SLC25A22 LOC143666 DEAF1 CD151 CRACR2B CDHR5 PNPLA2 CHID1 TALDO1 LRRC56 EPS8L2 CEND1 RPLP2 PHRF1 DRD4 RASSF7 TMEM80 TSPAN4 PIDD1 LMNTD2 PDDC1 MIR210 SCT LOC101059906 LOC171391 IRF7 RNH1 HRAS POLR2L SNORA52 MIR210HG
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PANO1 SLC25A22 CD151 CRACR2B TSPAN4 PNPLA2 CHID1 PIDD1 TALDO1 PDDC1 LOC171391 CEND1 POLR2L SNORA52 RPLP2

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More Information


Additional Information:

For this assay, SNP(s) [rs112955474] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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